Tungsten in PDB 8rcg: W-Formate Dehydrogenase M405S From Desulfovibrio Vulgaris

The structure of W-Formate Dehydrogenase M405S From Desulfovibrio Vulgaris, PDB code: 8rcg was solved by G.Vilela-Alves, R.R.Manuel, I.C.Pereira, M.J.Romao, C.Mota, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	48.59 / 2.01
Space group	P 21 21 21
Cell size a, b, c (Å), α, β, γ (°)	64.341, 127.226, 148.266, 90, 90, 90
R / Rfree (%)	21.2 / 25.3

The structure of W-Formate Dehydrogenase M405S From Desulfovibrio Vulgaris also contains other interesting chemical elements:

Iron

(Fe)

16 atoms

The binding sites of Tungsten atom in the W-Formate Dehydrogenase M405S From Desulfovibrio Vulgaris (pdb code 8rcg). This binding sites where shown within 5.0 Angstroms radius around Tungsten atom.
In total only one binding site of Tungsten was determined in the W-Formate Dehydrogenase M405S From Desulfovibrio Vulgaris, PDB code: 8rcg:

Tungsten binding site 1 out of 1 in the W-Formate Dehydrogenase M405S From Desulfovibrio Vulgaris


Mono view


Stereo pair view

A full contact list of Tungsten with other atoms in the W binding site number 1 of W-Formate Dehydrogenase M405S From Desulfovibrio Vulgaris within 5.0Å range: probe atom residue distance (Å) B Occ A:W1105 b:40.5 occ:1.00 S A:H2S1104 2.4 54.8 1.0 S13 A:MGD1101 2.5 26.7 1.0 SE A:SEC192 2.6 77.8 1.0 S12 A:MGD1101 2.6 26.9 1.0 S13 A:MGD1102 2.7 38.6 1.0 S12 A:MGD1102 2.7 35.0 1.0 C13 A:MGD1101 3.4 25.2 1.0 C12 A:MGD1101 3.4 24.9 1.0 C13 A:MGD1102 3.6 34.5 1.0 C12 A:MGD1102 3.7 35.8 1.0 CB A:SEC192 3.9 80.5 1.0 NH2 A:ARG884 4.2 29.7 1.0 O A:HOH1358 4.3 38.5 1.0 CA A:GLY442 4.3 28.9 1.0 NE2 A:GLN890 4.5 31.9 1.0 C14 A:MGD1101 4.8 25.1 1.0 OE1 A:GLN890 4.8 30.1 1.0 N A:GLY442 4.8 28.2 1.0 C11 A:MGD1101 4.8 24.7 1.0 N A:GLU443 4.9 27.7 1.0 O A:GLN188 5.0 51.6 1.0

G.Vilela-Alves, R.R.Manuel, N.Pedrosa, I.A.Cardoso Pereira, M.J.Romao, C.Mota. Structural and Biochemical Characterization of the M405S Variant of Formate Dehydrogenase Acta Cryst. F 2024.
DOI: 10.1107/S2053230X24003911