Tungsten in PDB 9beb: Tungstate Binding Protein (Tungbindin) From Eubacterium Limosum with Eight Tungstates Bound
Protein crystallography data
The structure of Tungstate Binding Protein (Tungbindin) From Eubacterium Limosum with Eight Tungstates Bound, PDB code: 9beb
was solved by
D.Zhou,
J.P.Rose,
L.Chen,
B.C.Wang,
with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:
|
Resolution Low / High (Å)
|
39.08 /
1.85
|
|
Space group
|
P 43 21 2
|
|
Cell size a, b, c (Å), α, β, γ (°)
|
74.816,
74.816,
156.312,
90,
90,
90
|
|
R / Rfree (%)
|
16.1 /
18.7
|
Tungsten Binding Sites:
The binding sites of Tungsten atom in the Tungstate Binding Protein (Tungbindin) From Eubacterium Limosum with Eight Tungstates Bound
(pdb code 9beb). This binding sites where shown within
5.0 Angstroms radius around Tungsten atom.
In total 8 binding sites of Tungsten where determined in the
Tungstate Binding Protein (Tungbindin) From Eubacterium Limosum with Eight Tungstates Bound, PDB code: 9beb:
Jump to Tungsten binding site number:
1;
2;
3;
4;
5;
6;
7;
8;
Tungsten binding site 1 out
of 8 in 9beb
Go back to
Tungsten Binding Sites List in 9beb
Tungsten binding site 1 out
of 8 in the Tungstate Binding Protein (Tungbindin) From Eubacterium Limosum with Eight Tungstates Bound
 Mono view
 Stereo pair view
|
|
A full contact list of Tungsten with other atoms in the W binding
site number 1 of Tungstate Binding Protein (Tungbindin) From Eubacterium Limosum with Eight Tungstates Bound within 5.0Å range:
|
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
A:W101
b:17.1
occ:1.00
|
W
|
A:WO4101
|
0.0
|
17.1
|
1.0
|
|
O3
|
A:WO4101
|
1.9
|
10.2
|
1.0
|
|
O4
|
A:WO4101
|
2.0
|
14.5
|
1.0
|
|
O2
|
A:WO4101
|
2.0
|
16.6
|
1.0
|
|
O1
|
A:WO4101
|
2.0
|
14.4
|
1.0
|
|
HG3
|
A:LYS60
|
3.1
|
14.5
|
1.0
|
|
H
|
E:SER40
|
3.2
|
19.3
|
1.0
|
|
H
|
A:ALA61
|
3.2
|
12.5
|
1.0
|
|
O
|
A:SER4
|
3.3
|
18.4
|
1.0
|
|
HA
|
A:ALA5
|
3.3
|
25.2
|
1.0
|
|
HG3
|
A:ARG6
|
3.3
|
23.0
|
1.0
|
|
HB
|
E:ILE39
|
3.4
|
14.5
|
1.0
|
|
HG21
|
E:ILE39
|
3.6
|
15.0
|
1.0
|
|
HG
|
A:SER4
|
3.6
|
17.6
|
1.0
|
|
H
|
A:ARG6
|
3.6
|
16.7
|
1.0
|
|
HG
|
E:SER40
|
3.7
|
17.7
|
1.0
|
|
HA
|
E:ILE39
|
3.7
|
16.3
|
1.0
|
|
HE2
|
A:LYS60
|
3.7
|
15.2
|
1.0
|
|
HG2
|
A:LYS60
|
3.7
|
14.5
|
1.0
|
|
HZ1
|
A:LYS60
|
3.8
|
15.3
|
1.0
|
|
CG
|
A:LYS60
|
3.8
|
12.1
|
1.0
|
|
HZ2
|
A:LYS60
|
3.9
|
15.3
|
1.0
|
|
HB2
|
A:ALA61
|
3.9
|
24.6
|
1.0
|
|
HB2
|
A:SER4
|
4.0
|
20.6
|
1.0
|
|
HB3
|
A:ALA61
|
4.0
|
24.6
|
1.0
|
|
C
|
A:SER4
|
4.0
|
23.7
|
1.0
|
|
N
|
E:SER40
|
4.0
|
16.1
|
1.0
|
|
N
|
A:ALA61
|
4.0
|
10.4
|
1.0
|
|
CB
|
E:ILE39
|
4.0
|
12.1
|
1.0
|
|
HA
|
A:LYS60
|
4.1
|
19.4
|
1.0
|
|
CA
|
A:ALA5
|
4.1
|
21.0
|
1.0
|
|
NZ
|
A:LYS60
|
4.1
|
12.8
|
1.0
|
|
HB3
|
E:SER40
|
4.2
|
21.6
|
1.0
|
|
CG2
|
E:ILE39
|
4.2
|
12.5
|
1.0
|
|
OG
|
A:SER4
|
4.2
|
14.7
|
1.0
|
|
O
|
B:HOH218
|
4.2
|
14.8
|
1.0
|
|
CG
|
A:ARG6
|
4.2
|
19.1
|
1.0
|
|
N
|
A:ARG6
|
4.2
|
13.9
|
1.0
|
|
CA
|
E:ILE39
|
4.3
|
13.6
|
1.0
|
|
HG2
|
A:ARG6
|
4.3
|
23.0
|
1.0
|
|
CE
|
A:LYS60
|
4.3
|
12.7
|
1.0
|
|
N
|
A:ALA5
|
4.3
|
16.3
|
1.0
|
|
CB
|
A:ALA61
|
4.3
|
20.5
|
1.0
|
|
HG22
|
E:ILE39
|
4.3
|
15.0
|
1.0
|
|
OG
|
E:SER43
|
4.4
|
15.8
|
1.0
|
|
OG
|
E:SER40
|
4.4
|
14.7
|
1.0
|
|
HB2
|
E:SER43
|
4.5
|
18.4
|
1.0
|
|
CB
|
A:SER4
|
4.5
|
17.1
|
1.0
|
|
H
|
A:THR62
|
4.6
|
14.4
|
1.0
|
|
C
|
A:ALA5
|
4.7
|
14.3
|
1.0
|
|
CB
|
E:SER40
|
4.7
|
18.0
|
1.0
|
|
C
|
E:ILE39
|
4.7
|
13.8
|
1.0
|
|
CD
|
A:LYS60
|
4.7
|
11.8
|
1.0
|
|
CA
|
A:LYS60
|
4.8
|
16.1
|
1.0
|
|
CA
|
A:ALA61
|
4.8
|
19.8
|
1.0
|
|
HG
|
E:SER43
|
4.9
|
18.9
|
1.0
|
|
CB
|
E:SER43
|
4.9
|
15.3
|
1.0
|
|
CB
|
A:LYS60
|
4.9
|
15.7
|
1.0
|
|
HB2
|
A:ARG6
|
4.9
|
20.1
|
1.0
|
|
C
|
A:LYS60
|
4.9
|
13.7
|
1.0
|
|
CA
|
A:SER4
|
4.9
|
24.2
|
1.0
|
|
HD2
|
A:ARG6
|
4.9
|
27.2
|
1.0
|
|
H
|
A:ALA5
|
5.0
|
19.6
|
1.0
|
|
HZ3
|
A:LYS60
|
5.0
|
15.3
|
1.0
|
|
Tungsten binding site 2 out
of 8 in 9beb
Go back to
Tungsten Binding Sites List in 9beb
Tungsten binding site 2 out
of 8 in the Tungstate Binding Protein (Tungbindin) From Eubacterium Limosum with Eight Tungstates Bound
 Mono view
 Stereo pair view
|
|
A full contact list of Tungsten with other atoms in the W binding
site number 2 of Tungstate Binding Protein (Tungbindin) From Eubacterium Limosum with Eight Tungstates Bound within 5.0Å range:
|
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
A:W102
b:18.8
occ:1.00
|
W
|
A:WO4102
|
0.0
|
18.8
|
1.0
|
|
O1
|
A:WO4102
|
2.0
|
15.2
|
1.0
|
|
O3
|
A:WO4102
|
2.0
|
13.8
|
1.0
|
|
O4
|
A:WO4102
|
2.0
|
14.7
|
1.0
|
|
O2
|
A:WO4102
|
2.0
|
17.6
|
1.0
|
|
HG22
|
F:VAL21
|
3.4
|
20.3
|
1.0
|
|
H
|
F:VAL21
|
3.5
|
20.1
|
1.0
|
|
HD21
|
C:ASN22
|
3.5
|
15.9
|
1.0
|
|
HD21
|
F:ASN22
|
3.5
|
24.4
|
1.0
|
|
H
|
A:VAL21
|
3.5
|
20.8
|
1.0
|
|
H
|
C:VAL21
|
3.6
|
16.2
|
1.0
|
|
HG21
|
C:VAL21
|
3.6
|
18.1
|
1.0
|
|
HB1
|
A:ALA20
|
3.6
|
22.0
|
1.0
|
|
HB3
|
F:ALA20
|
3.6
|
13.7
|
1.0
|
|
H
|
A:ALA20
|
3.6
|
20.8
|
1.0
|
|
H
|
F:ASN22
|
3.6
|
16.9
|
1.0
|
|
HD21
|
A:ASN22
|
3.6
|
20.5
|
1.0
|
|
H
|
A:ASN22
|
3.7
|
16.0
|
1.0
|
|
H
|
F:ALA20
|
3.7
|
21.9
|
1.0
|
|
H
|
C:ASN22
|
3.7
|
12.9
|
1.0
|
|
HB2
|
C:ASN22
|
3.7
|
18.4
|
1.0
|
|
HB2
|
C:ALA20
|
3.7
|
23.5
|
1.0
|
|
HB2
|
F:ASN22
|
3.7
|
17.6
|
1.0
|
|
HG23
|
A:VAL21
|
3.7
|
21.9
|
1.0
|
|
H
|
C:ALA20
|
3.8
|
21.8
|
1.0
|
|
HB2
|
A:ASN22
|
3.9
|
15.9
|
1.0
|
|
HG23
|
F:VAL21
|
3.9
|
20.3
|
1.0
|
|
HG22
|
A:VAL21
|
4.0
|
21.9
|
1.0
|
|
CG2
|
F:VAL21
|
4.1
|
16.9
|
1.0
|
|
HG23
|
C:VAL21
|
4.2
|
18.1
|
1.0
|
|
ND2
|
F:ASN22
|
4.3
|
20.4
|
1.0
|
|
ND2
|
C:ASN22
|
4.3
|
13.2
|
1.0
|
|
CG2
|
C:VAL21
|
4.3
|
15.1
|
1.0
|
|
N
|
F:VAL21
|
4.3
|
16.8
|
1.0
|
|
CG2
|
A:VAL21
|
4.3
|
18.3
|
1.0
|
|
N
|
F:ASN22
|
4.4
|
14.1
|
1.0
|
|
ND2
|
A:ASN22
|
4.4
|
17.1
|
1.0
|
|
N
|
A:VAL21
|
4.4
|
17.3
|
1.0
|
|
N
|
C:VAL21
|
4.4
|
13.5
|
1.0
|
|
N
|
A:ASN22
|
4.4
|
13.3
|
1.0
|
|
N
|
A:ALA20
|
4.4
|
17.3
|
1.0
|
|
N
|
C:ASN22
|
4.4
|
10.7
|
1.0
|
|
CB
|
A:ALA20
|
4.5
|
18.4
|
1.0
|
|
CB
|
F:ALA20
|
4.5
|
11.4
|
1.0
|
|
N
|
F:ALA20
|
4.5
|
18.2
|
1.0
|
|
N
|
C:ALA20
|
4.6
|
18.2
|
1.0
|
|
CB
|
C:ASN22
|
4.6
|
15.4
|
1.0
|
|
CB
|
F:ASN22
|
4.6
|
14.6
|
1.0
|
|
CB
|
C:ALA20
|
4.6
|
19.6
|
1.0
|
|
HG21
|
F:VAL21
|
4.7
|
20.3
|
1.0
|
|
HA3
|
F:GLY19
|
4.7
|
20.4
|
1.0
|
|
CB
|
A:ASN22
|
4.7
|
13.3
|
1.0
|
|
HA3
|
A:GLY19
|
4.7
|
21.2
|
1.0
|
|
HB3
|
A:ALA20
|
4.8
|
22.0
|
1.0
|
|
HD22
|
F:ASN22
|
4.8
|
24.4
|
1.0
|
|
HB1
|
F:ALA20
|
4.8
|
13.7
|
1.0
|
|
HD22
|
C:ASN22
|
4.8
|
15.9
|
1.0
|
|
HA3
|
C:GLY19
|
4.9
|
17.3
|
1.0
|
|
HB3
|
C:ALA20
|
4.9
|
23.5
|
1.0
|
|
HD22
|
A:ASN22
|
4.9
|
20.5
|
1.0
|
|
HG22
|
C:VAL21
|
4.9
|
18.1
|
1.0
|
|
HG21
|
A:VAL21
|
4.9
|
21.9
|
1.0
|
|
CA
|
A:ALA20
|
4.9
|
16.5
|
1.0
|
|
CG
|
F:ASN22
|
5.0
|
17.2
|
1.0
|
|
CG
|
C:ASN22
|
5.0
|
18.3
|
1.0
|
|
CA
|
F:ALA20
|
5.0
|
17.1
|
1.0
|
|
Tungsten binding site 3 out
of 8 in 9beb
Go back to
Tungsten Binding Sites List in 9beb
Tungsten binding site 3 out
of 8 in the Tungstate Binding Protein (Tungbindin) From Eubacterium Limosum with Eight Tungstates Bound
 Mono view
 Stereo pair view
|
|
A full contact list of Tungsten with other atoms in the W binding
site number 3 of Tungstate Binding Protein (Tungbindin) From Eubacterium Limosum with Eight Tungstates Bound within 5.0Å range:
|
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
B:W101
b:17.7
occ:1.00
|
W
|
B:WO4101
|
0.0
|
17.7
|
1.0
|
|
O3
|
B:WO4101
|
2.0
|
14.2
|
1.0
|
|
O2
|
B:WO4101
|
2.0
|
12.7
|
1.0
|
|
O1
|
B:WO4101
|
2.0
|
14.7
|
1.0
|
|
O4
|
B:WO4101
|
2.0
|
13.6
|
1.0
|
|
HG3
|
B:LYS60
|
3.0
|
13.6
|
1.0
|
|
H
|
C:SER40
|
3.2
|
17.7
|
1.0
|
|
H
|
B:ALA61
|
3.2
|
19.3
|
1.0
|
|
HG2
|
B:ARG6
|
3.2
|
25.1
|
1.0
|
|
HZ3
|
B:LYS60
|
3.3
|
18.2
|
1.0
|
|
HB
|
C:ILE39
|
3.4
|
17.1
|
1.0
|
|
HA
|
B:ALA5
|
3.4
|
19.4
|
1.0
|
|
HG21
|
C:ILE39
|
3.5
|
16.9
|
1.0
|
|
O
|
B:SER4
|
3.5
|
15.8
|
1.0
|
|
HG
|
C:SER40
|
3.6
|
21.5
|
1.0
|
|
H
|
B:ARG6
|
3.6
|
16.8
|
1.0
|
|
HG2
|
B:LYS60
|
3.7
|
13.6
|
1.0
|
|
HG
|
B:SER4
|
3.7
|
21.3
|
1.0
|
|
HA
|
C:ILE39
|
3.7
|
15.0
|
1.0
|
|
CG
|
B:LYS60
|
3.8
|
11.3
|
1.0
|
|
HB2
|
B:SER4
|
3.8
|
17.1
|
1.0
|
|
HB3
|
B:ALA61
|
3.9
|
18.9
|
1.0
|
|
HE2
|
B:LYS60
|
3.9
|
13.6
|
1.0
|
|
N
|
C:SER40
|
4.0
|
14.8
|
1.0
|
|
N
|
B:ALA61
|
4.0
|
16.1
|
1.0
|
|
C
|
B:SER4
|
4.0
|
14.3
|
1.0
|
|
NZ
|
B:LYS60
|
4.0
|
15.2
|
1.0
|
|
HA
|
B:LYS60
|
4.0
|
20.7
|
1.0
|
|
CB
|
C:ILE39
|
4.1
|
14.3
|
1.0
|
|
CG
|
B:ARG6
|
4.1
|
21.0
|
1.0
|
|
HB2
|
B:ALA61
|
4.1
|
18.9
|
1.0
|
|
CG2
|
C:ILE39
|
4.2
|
14.1
|
1.0
|
|
HG3
|
B:ARG6
|
4.2
|
25.1
|
1.0
|
|
HZ1
|
B:LYS60
|
4.2
|
18.2
|
1.0
|
|
HB3
|
C:SER40
|
4.2
|
19.2
|
1.0
|
|
CA
|
B:ALA5
|
4.2
|
16.2
|
1.0
|
|
N
|
B:ARG6
|
4.2
|
14.0
|
1.0
|
|
OG
|
C:SER43
|
4.2
|
28.6
|
1.0
|
|
OG
|
C:SER40
|
4.3
|
17.9
|
1.0
|
|
OG
|
B:SER4
|
4.3
|
17.8
|
1.0
|
|
CA
|
C:ILE39
|
4.3
|
12.5
|
1.0
|
|
HG2
|
D:MET65
|
4.3
|
16.5
|
1.0
|
|
O
|
A:HOH219
|
4.3
|
17.1
|
1.0
|
|
CE
|
B:LYS60
|
4.4
|
11.4
|
1.0
|
|
N
|
B:ALA5
|
4.4
|
14.3
|
1.0
|
|
CB
|
B:ALA61
|
4.4
|
15.8
|
1.0
|
|
CB
|
B:SER4
|
4.5
|
14.2
|
1.0
|
|
HG22
|
C:ILE39
|
4.5
|
16.9
|
1.0
|
|
HB2
|
C:SER43
|
4.5
|
30.0
|
1.0
|
|
H
|
B:THR62
|
4.6
|
12.9
|
1.0
|
|
CB
|
C:SER40
|
4.7
|
16.0
|
1.0
|
|
CD
|
B:LYS60
|
4.7
|
14.5
|
1.0
|
|
C
|
B:ALA5
|
4.7
|
20.6
|
1.0
|
|
C
|
C:ILE39
|
4.7
|
16.4
|
1.0
|
|
CA
|
B:LYS60
|
4.7
|
17.2
|
1.0
|
|
HZ2
|
B:LYS60
|
4.7
|
18.2
|
1.0
|
|
HG
|
C:SER43
|
4.8
|
34.4
|
1.0
|
|
CA
|
B:ALA61
|
4.8
|
13.3
|
1.0
|
|
CB
|
B:LYS60
|
4.9
|
10.2
|
1.0
|
|
HD3
|
B:ARG6
|
4.9
|
33.3
|
1.0
|
|
HB2
|
B:ARG6
|
4.9
|
22.9
|
1.0
|
|
CB
|
C:SER43
|
4.9
|
25.0
|
1.0
|
|
C
|
B:LYS60
|
4.9
|
12.6
|
1.0
|
|
CA
|
B:SER4
|
4.9
|
15.1
|
1.0
|
|
CA
|
C:SER40
|
5.0
|
8.7
|
1.0
|
|
CB
|
B:ARG6
|
5.0
|
19.1
|
1.0
|
|
HG23
|
C:ILE39
|
5.0
|
16.9
|
1.0
|
|
Tungsten binding site 4 out
of 8 in 9beb
Go back to
Tungsten Binding Sites List in 9beb
Tungsten binding site 4 out
of 8 in the Tungstate Binding Protein (Tungbindin) From Eubacterium Limosum with Eight Tungstates Bound
 Mono view
 Stereo pair view
|
|
A full contact list of Tungsten with other atoms in the W binding
site number 4 of Tungstate Binding Protein (Tungbindin) From Eubacterium Limosum with Eight Tungstates Bound within 5.0Å range:
|
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
C:W101
b:16.9
occ:1.00
|
W
|
C:WO4101
|
0.0
|
16.9
|
1.0
|
|
O1
|
C:WO4101
|
1.9
|
13.1
|
1.0
|
|
O3
|
C:WO4101
|
2.0
|
9.8
|
1.0
|
|
O2
|
C:WO4101
|
2.0
|
15.3
|
1.0
|
|
O4
|
C:WO4101
|
2.1
|
15.9
|
1.0
|
|
HG3
|
C:LYS60
|
3.1
|
13.9
|
1.0
|
|
H
|
B:SER40
|
3.2
|
14.1
|
1.0
|
|
HG2
|
C:ARG6
|
3.2
|
36.7
|
1.0
|
|
H
|
C:ALA61
|
3.3
|
15.6
|
1.0
|
|
HZ1
|
C:LYS60
|
3.3
|
12.9
|
1.0
|
|
HA
|
C:ALA5
|
3.3
|
18.7
|
1.0
|
|
HG22
|
B:ILE39
|
3.5
|
14.6
|
1.0
|
|
HB
|
B:ILE39
|
3.5
|
14.4
|
1.0
|
|
HG2
|
C:LYS60
|
3.5
|
13.9
|
1.0
|
|
O
|
C:SER4
|
3.5
|
15.7
|
1.0
|
|
HG
|
B:SER43
|
3.6
|
33.8
|
1.0
|
|
H
|
C:ARG6
|
3.6
|
19.5
|
1.0
|
|
CG
|
C:LYS60
|
3.7
|
11.6
|
1.0
|
|
HA
|
B:ILE39
|
3.8
|
22.6
|
1.0
|
|
HB3
|
C:ALA61
|
3.9
|
19.3
|
1.0
|
|
HA
|
C:LYS60
|
4.0
|
13.7
|
1.0
|
|
HB2
|
C:SER4
|
4.0
|
16.8
|
1.0
|
|
N
|
B:SER40
|
4.0
|
11.8
|
1.0
|
|
HE
|
C:ARG6
|
4.0
|
30.2
|
1.0
|
|
C
|
C:SER4
|
4.1
|
15.3
|
1.0
|
|
HB3
|
B:SER40
|
4.1
|
20.0
|
1.0
|
|
N
|
C:ALA61
|
4.1
|
13.0
|
1.0
|
|
HE2
|
C:LYS60
|
4.1
|
18.2
|
1.0
|
|
NZ
|
C:LYS60
|
4.1
|
10.8
|
1.0
|
|
CA
|
C:ALA5
|
4.1
|
15.6
|
1.0
|
|
CB
|
B:ILE39
|
4.1
|
12.0
|
1.0
|
|
OG
|
C:SER4
|
4.1
|
13.8
|
1.0
|
|
CG2
|
B:ILE39
|
4.2
|
12.2
|
1.0
|
|
CG
|
C:ARG6
|
4.2
|
30.6
|
1.0
|
|
N
|
C:ARG6
|
4.2
|
16.3
|
1.0
|
|
HB2
|
C:ALA61
|
4.3
|
19.3
|
1.0
|
|
HG2
|
A:MET65
|
4.3
|
15.4
|
1.0
|
|
OG
|
B:SER43
|
4.3
|
28.1
|
1.0
|
|
O
|
D:HOH225
|
4.3
|
13.2
|
1.0
|
|
OG
|
B:SER40
|
4.4
|
15.1
|
1.0
|
|
N
|
C:ALA5
|
4.4
|
14.8
|
1.0
|
|
HG21
|
B:ILE39
|
4.4
|
14.6
|
1.0
|
|
CA
|
B:ILE39
|
4.4
|
18.8
|
1.0
|
|
HZ3
|
C:LYS60
|
4.4
|
12.9
|
1.0
|
|
HG3
|
C:ARG6
|
4.4
|
36.7
|
1.0
|
|
CB
|
C:ALA61
|
4.5
|
16.1
|
1.0
|
|
CE
|
C:LYS60
|
4.5
|
15.2
|
1.0
|
|
CB
|
C:SER4
|
4.5
|
14.0
|
1.0
|
|
HB2
|
B:SER43
|
4.5
|
20.8
|
1.0
|
|
C
|
C:ALA5
|
4.6
|
18.2
|
1.0
|
|
CB
|
B:SER40
|
4.6
|
16.7
|
1.0
|
|
H
|
C:THR62
|
4.6
|
17.0
|
1.0
|
|
HZ2
|
C:LYS60
|
4.7
|
12.9
|
1.0
|
|
CA
|
C:LYS60
|
4.7
|
11.4
|
1.0
|
|
HG
|
B:SER40
|
4.7
|
18.1
|
1.0
|
|
NE
|
C:ARG6
|
4.7
|
25.1
|
1.0
|
|
CD
|
C:LYS60
|
4.7
|
11.2
|
1.0
|
|
C
|
B:ILE39
|
4.8
|
17.5
|
1.0
|
|
HD2
|
C:ARG6
|
4.8
|
35.5
|
1.0
|
|
CB
|
C:LYS60
|
4.8
|
8.5
|
1.0
|
|
HG
|
C:SER4
|
4.8
|
16.6
|
1.0
|
|
CD
|
C:ARG6
|
4.8
|
29.6
|
1.0
|
|
C
|
C:LYS60
|
4.9
|
15.2
|
1.0
|
|
CB
|
B:SER43
|
4.9
|
17.3
|
1.0
|
|
CA
|
C:ALA61
|
4.9
|
18.0
|
1.0
|
|
CA
|
C:SER4
|
5.0
|
18.2
|
1.0
|
|
CA
|
B:SER40
|
5.0
|
15.4
|
1.0
|
|
HG23
|
B:ILE39
|
5.0
|
14.6
|
1.0
|
|
Tungsten binding site 5 out
of 8 in 9beb
Go back to
Tungsten Binding Sites List in 9beb
Tungsten binding site 5 out
of 8 in the Tungstate Binding Protein (Tungbindin) From Eubacterium Limosum with Eight Tungstates Bound
 Mono view
 Stereo pair view
|
|
A full contact list of Tungsten with other atoms in the W binding
site number 5 of Tungstate Binding Protein (Tungbindin) From Eubacterium Limosum with Eight Tungstates Bound within 5.0Å range:
|
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
D:W101
b:15.8
occ:1.00
|
W
|
D:WO4101
|
0.0
|
15.8
|
1.0
|
|
O2
|
D:WO4101
|
1.9
|
11.8
|
1.0
|
|
O1
|
D:WO4101
|
2.0
|
12.2
|
1.0
|
|
O3
|
D:WO4101
|
2.0
|
14.3
|
1.0
|
|
O4
|
D:WO4101
|
2.0
|
14.2
|
1.0
|
|
H
|
F:SER40
|
3.2
|
15.2
|
1.0
|
|
H
|
D:ALA61
|
3.3
|
14.2
|
1.0
|
|
HG2
|
D:ARG6
|
3.3
|
27.9
|
1.0
|
|
HA
|
D:ALA5
|
3.3
|
18.0
|
1.0
|
|
HG22
|
F:ILE39
|
3.4
|
20.8
|
1.0
|
|
O
|
D:SER4
|
3.5
|
14.8
|
1.0
|
|
HB
|
F:ILE39
|
3.6
|
13.5
|
1.0
|
|
H
|
D:ARG6
|
3.6
|
18.9
|
1.0
|
|
HG
|
F:SER43
|
3.6
|
39.8
|
1.0
|
|
CG
|
D:LYS60
|
3.7
|
11.3
|
1.0
|
|
HB3
|
D:ALA61
|
3.8
|
12.2
|
1.0
|
|
HA
|
F:ILE39
|
3.8
|
16.5
|
1.0
|
|
N
|
F:SER40
|
4.1
|
12.7
|
1.0
|
|
OG
|
D:SER4
|
4.1
|
12.4
|
1.0
|
|
N
|
D:ALA61
|
4.1
|
11.8
|
1.0
|
|
C
|
D:SER4
|
4.1
|
18.4
|
1.0
|
|
HE
|
D:ARG6
|
4.1
|
43.5
|
1.0
|
|
HB2
|
D:SER4
|
4.1
|
18.8
|
1.0
|
|
NZ
|
D:LYS60
|
4.1
|
13.0
|
1.0
|
|
CG2
|
F:ILE39
|
4.1
|
17.3
|
1.0
|
|
CA
|
D:ALA5
|
4.1
|
15.0
|
1.0
|
|
HB3
|
F:SER40
|
4.1
|
25.2
|
1.0
|
|
CB
|
F:ILE39
|
4.2
|
11.2
|
1.0
|
|
OG
|
F:SER43
|
4.2
|
33.1
|
1.0
|
|
CG
|
D:ARG6
|
4.2
|
23.3
|
1.0
|
|
N
|
D:ARG6
|
4.2
|
15.7
|
1.0
|
|
O
|
C:HOH239
|
4.2
|
12.0
|
1.0
|
|
OG
|
F:SER40
|
4.3
|
13.9
|
1.0
|
|
N
|
D:ALA5
|
4.4
|
12.4
|
1.0
|
|
CA
|
F:ILE39
|
4.4
|
13.8
|
1.0
|
|
HG21
|
F:ILE39
|
4.4
|
20.8
|
1.0
|
|
HB2
|
D:ALA61
|
4.4
|
12.2
|
1.0
|
|
HG3
|
D:ARG6
|
4.4
|
27.9
|
1.0
|
|
CB
|
D:ALA61
|
4.5
|
10.2
|
1.0
|
|
CE
|
D:LYS60
|
4.5
|
9.9
|
1.0
|
|
HB2
|
F:SER43
|
4.5
|
30.8
|
1.0
|
|
CB
|
D:SER4
|
4.6
|
15.7
|
1.0
|
|
HG
|
F:SER40
|
4.6
|
16.7
|
1.0
|
|
H
|
D:THR62
|
4.6
|
17.6
|
1.0
|
|
C
|
D:ALA5
|
4.6
|
18.3
|
1.0
|
|
CA
|
D:LYS60
|
4.6
|
10.3
|
1.0
|
|
CB
|
F:SER40
|
4.7
|
21.0
|
1.0
|
|
CB
|
D:LYS60
|
4.7
|
10.2
|
1.0
|
|
CD
|
D:LYS60
|
4.7
|
14.0
|
1.0
|
|
NE
|
D:ARG6
|
4.8
|
36.2
|
1.0
|
|
HG
|
D:SER4
|
4.8
|
14.8
|
1.0
|
|
HD2
|
D:ARG6
|
4.8
|
30.1
|
1.0
|
|
C
|
F:ILE39
|
4.8
|
13.8
|
1.0
|
|
CD
|
D:ARG6
|
4.9
|
25.1
|
1.0
|
|
CB
|
F:SER43
|
4.9
|
25.6
|
1.0
|
|
C
|
D:LYS60
|
4.9
|
16.4
|
1.0
|
|
CA
|
D:ALA61
|
4.9
|
14.8
|
1.0
|
|
HG23
|
F:ILE39
|
4.9
|
20.8
|
1.0
|
|
Tungsten binding site 6 out
of 8 in 9beb
Go back to
Tungsten Binding Sites List in 9beb
Tungsten binding site 6 out
of 8 in the Tungstate Binding Protein (Tungbindin) From Eubacterium Limosum with Eight Tungstates Bound
 Mono view
 Stereo pair view
|
|
A full contact list of Tungsten with other atoms in the W binding
site number 6 of Tungstate Binding Protein (Tungbindin) From Eubacterium Limosum with Eight Tungstates Bound within 5.0Å range:
|
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
E:W101
b:18.3
occ:1.00
|
W
|
E:WO4101
|
0.0
|
18.3
|
1.0
|
|
O3
|
E:WO4101
|
2.0
|
15.0
|
1.0
|
|
O4
|
E:WO4101
|
2.0
|
14.1
|
1.0
|
|
O2
|
E:WO4101
|
2.0
|
16.7
|
1.0
|
|
O1
|
E:WO4101
|
2.0
|
18.1
|
1.0
|
|
HD21
|
E:ASN22
|
3.5
|
24.7
|
1.0
|
|
HG22
|
B:VAL21
|
3.5
|
25.2
|
1.0
|
|
HG23
|
D:VAL21
|
3.5
|
18.7
|
1.0
|
|
HD21
|
B:ASN22
|
3.5
|
19.0
|
1.0
|
|
H
|
B:VAL21
|
3.5
|
18.9
|
1.0
|
|
H
|
E:ALA20
|
3.6
|
19.3
|
1.0
|
|
H
|
D:VAL21
|
3.6
|
19.8
|
1.0
|
|
HB3
|
D:ALA20
|
3.6
|
19.7
|
1.0
|
|
H
|
B:ALA20
|
3.6
|
18.7
|
1.0
|
|
H
|
E:VAL21
|
3.6
|
23.9
|
1.0
|
|
H
|
D:ASN22
|
3.6
|
17.9
|
1.0
|
|
HB2
|
E:ALA20
|
3.6
|
24.6
|
1.0
|
|
H
|
B:ASN22
|
3.7
|
18.7
|
1.0
|
|
HB3
|
B:ALA20
|
3.7
|
21.6
|
1.0
|
|
HB2
|
D:ASN22
|
3.7
|
16.8
|
1.0
|
|
HG22
|
E:VAL21
|
3.7
|
19.9
|
1.0
|
|
HD22
|
D:ASN22
|
3.7
|
18.8
|
1.0
|
|
HB2
|
B:ASN22
|
3.8
|
13.9
|
1.0
|
|
H
|
D:ALA20
|
3.8
|
20.2
|
1.0
|
|
H
|
E:ASN22
|
3.8
|
18.1
|
1.0
|
|
HB2
|
E:ASN22
|
3.8
|
20.9
|
1.0
|
|
HG23
|
B:VAL21
|
4.1
|
25.2
|
1.0
|
|
HG23
|
E:VAL21
|
4.1
|
19.9
|
1.0
|
|
HG21
|
D:VAL21
|
4.2
|
18.7
|
1.0
|
|
CG2
|
B:VAL21
|
4.2
|
21.0
|
1.0
|
|
ND2
|
E:ASN22
|
4.3
|
20.6
|
1.0
|
|
CG2
|
D:VAL21
|
4.3
|
15.6
|
1.0
|
|
ND2
|
B:ASN22
|
4.3
|
15.8
|
1.0
|
|
CG2
|
E:VAL21
|
4.4
|
16.6
|
1.0
|
|
N
|
D:ASN22
|
4.4
|
14.9
|
1.0
|
|
N
|
B:VAL21
|
4.4
|
15.8
|
1.0
|
|
N
|
E:ALA20
|
4.4
|
16.1
|
1.0
|
|
N
|
B:ASN22
|
4.4
|
15.6
|
1.0
|
|
N
|
B:ALA20
|
4.4
|
15.6
|
1.0
|
|
N
|
D:VAL21
|
4.4
|
16.5
|
1.0
|
|
N
|
E:VAL21
|
4.5
|
19.9
|
1.0
|
|
ND2
|
D:ASN22
|
4.5
|
15.7
|
1.0
|
|
CB
|
E:ALA20
|
4.5
|
20.5
|
1.0
|
|
N
|
E:ASN22
|
4.5
|
15.1
|
1.0
|
|
CB
|
D:ALA20
|
4.5
|
16.4
|
1.0
|
|
CB
|
B:ALA20
|
4.6
|
18.0
|
1.0
|
|
N
|
D:ALA20
|
4.6
|
16.9
|
1.0
|
|
CB
|
D:ASN22
|
4.6
|
14.0
|
1.0
|
|
CB
|
B:ASN22
|
4.6
|
11.6
|
1.0
|
|
HA3
|
B:GLY19
|
4.7
|
21.9
|
1.0
|
|
CB
|
E:ASN22
|
4.7
|
17.4
|
1.0
|
|
HA3
|
E:GLY19
|
4.7
|
26.4
|
1.0
|
|
HG21
|
B:VAL21
|
4.7
|
25.2
|
1.0
|
|
HD22
|
E:ASN22
|
4.7
|
24.7
|
1.0
|
|
HB1
|
E:ALA20
|
4.8
|
24.6
|
1.0
|
|
HD22
|
B:ASN22
|
4.8
|
19.0
|
1.0
|
|
HG22
|
D:VAL21
|
4.8
|
18.7
|
1.0
|
|
HB1
|
B:ALA20
|
4.8
|
21.6
|
1.0
|
|
HB1
|
D:ALA20
|
4.8
|
19.7
|
1.0
|
|
HA3
|
D:GLY19
|
4.9
|
15.8
|
1.0
|
|
HG21
|
E:VAL21
|
4.9
|
19.9
|
1.0
|
|
CA
|
B:ALA20
|
5.0
|
16.0
|
1.0
|
|
CA
|
E:ALA20
|
5.0
|
18.2
|
1.0
|
|
CG
|
B:ASN22
|
5.0
|
12.2
|
1.0
|
|
CG
|
E:ASN22
|
5.0
|
11.9
|
1.0
|
|
HD21
|
D:ASN22
|
5.0
|
18.8
|
1.0
|
|
Tungsten binding site 7 out
of 8 in 9beb
Go back to
Tungsten Binding Sites List in 9beb
Tungsten binding site 7 out
of 8 in the Tungstate Binding Protein (Tungbindin) From Eubacterium Limosum with Eight Tungstates Bound
 Mono view
 Stereo pair view
|
|
A full contact list of Tungsten with other atoms in the W binding
site number 7 of Tungstate Binding Protein (Tungbindin) From Eubacterium Limosum with Eight Tungstates Bound within 5.0Å range:
|
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
E:W102
b:18.2
occ:1.00
|
W
|
E:WO4102
|
0.0
|
18.2
|
1.0
|
|
O2
|
E:WO4102
|
2.0
|
11.1
|
1.0
|
|
O4
|
E:WO4102
|
2.0
|
18.4
|
1.0
|
|
O3
|
E:WO4102
|
2.0
|
18.1
|
1.0
|
|
O1
|
E:WO4102
|
2.1
|
18.4
|
1.0
|
|
HG3
|
E:LYS60
|
3.2
|
20.6
|
1.0
|
|
H
|
E:ALA61
|
3.2
|
16.0
|
1.0
|
|
H
|
A:SER40
|
3.2
|
19.9
|
1.0
|
|
HG2
|
E:ARG6
|
3.2
|
26.9
|
1.0
|
|
HB
|
A:ILE39
|
3.3
|
18.5
|
1.0
|
|
HA
|
E:ALA5
|
3.4
|
17.0
|
1.0
|
|
HZ3
|
E:LYS60
|
3.5
|
11.8
|
1.0
|
|
HG21
|
A:ILE39
|
3.5
|
23.8
|
1.0
|
|
O
|
E:SER4
|
3.5
|
17.1
|
1.0
|
|
HG2
|
E:LYS60
|
3.6
|
20.6
|
1.0
|
|
H
|
E:ARG6
|
3.6
|
16.6
|
1.0
|
|
HG
|
E:SER4
|
3.7
|
20.7
|
1.0
|
|
HE2
|
E:LYS60
|
3.7
|
13.8
|
1.0
|
|
HG
|
A:SER43
|
3.7
|
27.4
|
1.0
|
|
HA
|
A:ILE39
|
3.7
|
19.0
|
1.0
|
|
CG
|
E:LYS60
|
3.8
|
17.2
|
1.0
|
|
HB3
|
E:ALA61
|
3.8
|
14.1
|
1.0
|
|
HG
|
A:SER40
|
3.9
|
19.1
|
1.0
|
|
HB2
|
E:SER4
|
4.0
|
24.7
|
1.0
|
|
CB
|
A:ILE39
|
4.0
|
15.4
|
1.0
|
|
N
|
E:ALA61
|
4.0
|
13.3
|
1.0
|
|
N
|
A:SER40
|
4.0
|
16.6
|
1.0
|
|
HA
|
E:LYS60
|
4.1
|
13.3
|
1.0
|
|
HD3
|
E:ARG6
|
4.1
|
32.4
|
1.0
|
|
C
|
E:SER4
|
4.1
|
17.8
|
1.0
|
|
CG2
|
A:ILE39
|
4.1
|
19.9
|
1.0
|
|
CG
|
E:ARG6
|
4.2
|
22.4
|
1.0
|
|
NZ
|
E:LYS60
|
4.2
|
9.8
|
1.0
|
|
HB3
|
A:SER40
|
4.2
|
18.5
|
1.0
|
|
CA
|
E:ALA5
|
4.2
|
14.2
|
1.0
|
|
N
|
E:ARG6
|
4.2
|
13.9
|
1.0
|
|
HG22
|
A:ILE39
|
4.2
|
23.8
|
1.0
|
|
HB2
|
E:ALA61
|
4.3
|
14.1
|
1.0
|
|
HG2
|
B:MET65
|
4.3
|
19.4
|
1.0
|
|
O
|
F:HOH229
|
4.3
|
16.6
|
1.0
|
|
CA
|
A:ILE39
|
4.3
|
15.8
|
1.0
|
|
CE
|
E:LYS60
|
4.3
|
11.5
|
1.0
|
|
HZ2
|
E:LYS60
|
4.3
|
11.8
|
1.0
|
|
OG
|
E:SER4
|
4.4
|
17.2
|
1.0
|
|
OG
|
A:SER43
|
4.4
|
22.8
|
1.0
|
|
HD2
|
E:ARG6
|
4.4
|
32.4
|
1.0
|
|
OG
|
A:SER40
|
4.4
|
15.9
|
1.0
|
|
N
|
E:ALA5
|
4.4
|
19.9
|
1.0
|
|
CB
|
E:ALA61
|
4.4
|
11.8
|
1.0
|
|
CD
|
E:ARG6
|
4.4
|
27.0
|
1.0
|
|
HB2
|
A:SER43
|
4.5
|
23.8
|
1.0
|
|
CB
|
E:SER4
|
4.6
|
20.6
|
1.0
|
|
H
|
E:THR62
|
4.6
|
17.2
|
1.0
|
|
HG3
|
E:ARG6
|
4.6
|
26.9
|
1.0
|
|
C
|
E:ALA5
|
4.7
|
18.1
|
1.0
|
|
CB
|
A:SER40
|
4.7
|
15.4
|
1.0
|
|
CD
|
E:LYS60
|
4.7
|
12.5
|
1.0
|
|
C
|
A:ILE39
|
4.7
|
14.5
|
1.0
|
|
CA
|
E:LYS60
|
4.8
|
11.1
|
1.0
|
|
HG3
|
B:MET65
|
4.8
|
19.4
|
1.0
|
|
CA
|
E:ALA61
|
4.9
|
11.0
|
1.0
|
|
CB
|
E:LYS60
|
4.9
|
14.5
|
1.0
|
|
C
|
E:LYS60
|
4.9
|
14.2
|
1.0
|
|
HZ1
|
E:LYS60
|
4.9
|
11.8
|
1.0
|
|
CB
|
A:SER43
|
4.9
|
19.9
|
1.0
|
|
Tungsten binding site 8 out
of 8 in 9beb
Go back to
Tungsten Binding Sites List in 9beb
Tungsten binding site 8 out
of 8 in the Tungstate Binding Protein (Tungbindin) From Eubacterium Limosum with Eight Tungstates Bound
 Mono view
 Stereo pair view
|
|
A full contact list of Tungsten with other atoms in the W binding
site number 8 of Tungstate Binding Protein (Tungbindin) From Eubacterium Limosum with Eight Tungstates Bound within 5.0Å range:
|
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
F:W101
b:16.8
occ:1.00
|
W
|
F:WO4101
|
0.0
|
16.8
|
1.0
|
|
O4
|
F:WO4101
|
2.0
|
15.8
|
1.0
|
|
O3
|
F:WO4101
|
2.0
|
16.6
|
1.0
|
|
O1
|
F:WO4101
|
2.0
|
14.1
|
1.0
|
|
O2
|
F:WO4101
|
2.0
|
17.1
|
1.0
|
|
HG2
|
F:ARG6
|
3.2
|
31.1
|
1.0
|
|
H
|
D:SER40
|
3.2
|
14.1
|
1.0
|
|
H
|
F:ALA61
|
3.3
|
15.7
|
1.0
|
|
HA
|
F:ALA5
|
3.4
|
16.1
|
1.0
|
|
HG22
|
D:ILE39
|
3.4
|
12.3
|
1.0
|
|
HB
|
D:ILE39
|
3.5
|
18.1
|
1.0
|
|
H
|
F:ARG6
|
3.6
|
14.1
|
1.0
|
|
HG
|
D:SER43
|
3.6
|
35.5
|
1.0
|
|
O
|
F:SER4
|
3.6
|
15.6
|
1.0
|
|
HA
|
D:ILE39
|
3.7
|
21.3
|
1.0
|
|
HG
|
D:SER40
|
3.8
|
19.0
|
1.0
|
|
HB1
|
F:ALA61
|
3.9
|
27.6
|
1.0
|
|
CG
|
F:LYS60
|
3.9
|
13.4
|
1.0
|
|
HB2
|
F:SER4
|
4.0
|
18.9
|
1.0
|
|
N
|
D:SER40
|
4.0
|
11.8
|
1.0
|
|
HB3
|
D:SER40
|
4.0
|
16.0
|
1.0
|
|
CG
|
F:ARG6
|
4.1
|
25.9
|
1.0
|
|
NZ
|
F:LYS60
|
4.1
|
11.5
|
1.0
|
|
CB
|
D:ILE39
|
4.1
|
15.1
|
1.0
|
|
N
|
F:ALA61
|
4.1
|
13.1
|
1.0
|
|
C
|
F:SER4
|
4.1
|
14.7
|
1.0
|
|
CG2
|
D:ILE39
|
4.2
|
10.2
|
1.0
|
|
N
|
F:ARG6
|
4.2
|
11.8
|
1.0
|
|
CA
|
F:ALA5
|
4.2
|
13.4
|
1.0
|
|
OG
|
F:SER4
|
4.2
|
12.8
|
1.0
|
|
HB3
|
F:ALA61
|
4.2
|
27.6
|
1.0
|
|
O
|
E:HOH229
|
4.2
|
14.8
|
1.0
|
|
HG3
|
F:ARG6
|
4.3
|
31.1
|
1.0
|
|
HE
|
F:ARG6
|
4.3
|
45.1
|
1.0
|
|
HG2
|
C:MET65
|
4.3
|
18.0
|
1.0
|
|
OG
|
D:SER43
|
4.3
|
29.6
|
1.0
|
|
CA
|
D:ILE39
|
4.3
|
17.7
|
1.0
|
|
OG
|
D:SER40
|
4.4
|
15.9
|
1.0
|
|
N
|
F:ALA5
|
4.4
|
13.1
|
1.0
|
|
CB
|
F:ALA61
|
4.5
|
23.0
|
1.0
|
|
CE
|
F:LYS60
|
4.5
|
7.9
|
1.0
|
|
CB
|
F:SER4
|
4.5
|
15.7
|
1.0
|
|
HB2
|
D:SER43
|
4.5
|
25.0
|
1.0
|
|
HG21
|
D:ILE39
|
4.6
|
12.3
|
1.0
|
|
CB
|
D:SER40
|
4.6
|
13.4
|
1.0
|
|
H
|
F:THR62
|
4.6
|
10.0
|
1.0
|
|
C
|
F:ALA5
|
4.7
|
12.0
|
1.0
|
|
C
|
D:ILE39
|
4.7
|
14.8
|
1.0
|
|
CA
|
F:LYS60
|
4.8
|
18.3
|
1.0
|
|
CD
|
F:LYS60
|
4.8
|
7.7
|
1.0
|
|
HG23
|
D:ILE39
|
4.9
|
12.3
|
1.0
|
|
NE
|
F:ARG6
|
4.9
|
37.6
|
1.0
|
|
CA
|
F:ALA61
|
4.9
|
16.9
|
1.0
|
|
CB
|
D:SER43
|
4.9
|
20.9
|
1.0
|
|
CB
|
F:LYS60
|
4.9
|
12.6
|
1.0
|
|
HB2
|
F:ARG6
|
5.0
|
29.8
|
1.0
|
|
C
|
F:LYS60
|
5.0
|
13.2
|
1.0
|
|
CD
|
F:ARG6
|
5.0
|
23.7
|
1.0
|
|
HG
|
F:SER4
|
5.0
|
15.3
|
1.0
|
|
CA
|
D:SER40
|
5.0
|
14.2
|
1.0
|
|
CB
|
F:ARG6
|
5.0
|
24.8
|
1.0
|
|
Reference:
D.Zhou,
J.P.Rose,
L.Chen,
B.C.Wang.
Tungstate Binding Protein (Tungbindin) From Eubacterium Limosum with Eight Tungstates Bound To Be Published.
Page generated: Sat Oct 12 16:17:30 2024
|
