Tungsten in PDB 8qln: Crystal Structure of An N-Terminal Fragment of Hcmv UL47
Protein crystallography data
The structure of Crystal Structure of An N-Terminal Fragment of Hcmv UL47, PDB code: 8qln
was solved by
C.L.Rehfeld,
T.F.Reubold,
S.Eschenburg,
with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:
Resolution Low / High (Å)
|
46.44 /
2.51
|
Space group
|
P 43 21 2
|
Cell size a, b, c (Å), α, β, γ (°)
|
64.96,
64.96,
265.67,
90,
90,
90
|
R / Rfree (%)
|
21.5 /
25.1
|
Other elements in 8qln:
The structure of Crystal Structure of An N-Terminal Fragment of Hcmv UL47 also contains other interesting chemical elements:
Tungsten Binding Sites:
The binding sites of Tungsten atom in the Crystal Structure of An N-Terminal Fragment of Hcmv UL47
(pdb code 8qln). This binding sites where shown within
5.0 Angstroms radius around Tungsten atom.
In total 6 binding sites of Tungsten where determined in the
Crystal Structure of An N-Terminal Fragment of Hcmv UL47, PDB code: 8qln:
Jump to Tungsten binding site number:
1;
2;
3;
4;
5;
6;
Tungsten binding site 1 out
of 6 in 8qln
Go back to
Tungsten Binding Sites List in 8qln
Tungsten binding site 1 out
of 6 in the Crystal Structure of An N-Terminal Fragment of Hcmv UL47
Mono view
Stereo pair view
|
A full contact list of Tungsten with other atoms in the W binding
site number 1 of Crystal Structure of An N-Terminal Fragment of Hcmv UL47 within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
A:W601
b:72.2
occ:1.00
|
W1
|
A:TEW601
|
0.0
|
72.2
|
1.0
|
O6
|
A:TEW601
|
1.7
|
81.7
|
1.0
|
O5
|
A:TEW601
|
1.7
|
86.8
|
1.0
|
O4
|
A:TEW601
|
1.9
|
66.8
|
1.0
|
O3
|
A:TEW601
|
1.9
|
80.5
|
1.0
|
O1
|
A:TEW601
|
2.3
|
79.3
|
1.0
|
O2
|
A:TEW601
|
2.3
|
85.2
|
1.0
|
TE1
|
A:TEW601
|
3.3
|
68.6
|
1.0
|
W3
|
A:TEW601
|
3.3
|
73.1
|
1.0
|
W2
|
A:TEW601
|
3.3
|
79.4
|
1.0
|
NH1
|
A:ARG346
|
3.6
|
68.7
|
1.0
|
O15
|
A:TEW601
|
3.7
|
89.5
|
1.0
|
O8
|
A:TEW601
|
3.7
|
87.7
|
1.0
|
O7
|
A:TEW601
|
3.8
|
89.9
|
1.0
|
O13
|
A:TEW601
|
3.9
|
78.2
|
1.0
|
O
|
A:HOH711
|
4.0
|
75.5
|
1.0
|
O9
|
A:TEW601
|
4.5
|
85.3
|
1.0
|
O16
|
A:TEW601
|
4.5
|
59.4
|
1.0
|
CZ
|
A:ARG346
|
4.6
|
72.1
|
1.0
|
O14
|
A:TEW601
|
4.7
|
82.6
|
1.0
|
O10
|
A:TEW601
|
4.8
|
87.3
|
1.0
|
CD
|
A:ARG346
|
4.8
|
68.9
|
1.0
|
O11
|
A:TEW601
|
4.9
|
81.9
|
1.0
|
O12
|
A:TEW601
|
4.9
|
81.2
|
1.0
|
|
Tungsten binding site 2 out
of 6 in 8qln
Go back to
Tungsten Binding Sites List in 8qln
Tungsten binding site 2 out
of 6 in the Crystal Structure of An N-Terminal Fragment of Hcmv UL47
Mono view
Stereo pair view
|
A full contact list of Tungsten with other atoms in the W binding
site number 2 of Crystal Structure of An N-Terminal Fragment of Hcmv UL47 within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
A:W601
b:79.4
occ:1.00
|
W2
|
A:TEW601
|
0.0
|
79.4
|
1.0
|
O9
|
A:TEW601
|
1.7
|
85.3
|
1.0
|
O8
|
A:TEW601
|
1.7
|
87.7
|
1.0
|
O10
|
A:TEW601
|
1.9
|
87.3
|
1.0
|
O3
|
A:TEW601
|
1.9
|
80.5
|
1.0
|
O7
|
A:TEW601
|
2.2
|
89.9
|
1.0
|
O1
|
A:TEW601
|
2.3
|
79.3
|
1.0
|
TE1
|
A:TEW601
|
3.3
|
68.6
|
1.0
|
W4
|
A:TEW601
|
3.3
|
75.2
|
1.0
|
W1
|
A:TEW601
|
3.3
|
72.2
|
1.0
|
O19
|
A:TEW601
|
3.7
|
64.0
|
1.0
|
O
|
A:HOH718
|
3.7
|
71.9
|
1.0
|
O6
|
A:TEW601
|
3.8
|
81.7
|
1.0
|
O2
|
A:TEW601
|
3.8
|
85.2
|
1.0
|
O12
|
A:TEW601
|
3.8
|
81.2
|
1.0
|
O
|
A:HOH711
|
4.0
|
75.5
|
1.0
|
NH1
|
A:ARG346
|
4.4
|
68.7
|
1.0
|
O5
|
A:TEW601
|
4.5
|
86.8
|
1.0
|
O18
|
A:TEW601
|
4.6
|
80.4
|
1.0
|
O17
|
A:TEW601
|
4.7
|
74.2
|
1.0
|
O4
|
A:TEW601
|
4.8
|
66.8
|
1.0
|
O11
|
A:TEW601
|
4.8
|
81.9
|
1.0
|
O13
|
A:TEW601
|
5.0
|
78.2
|
1.0
|
|
Tungsten binding site 3 out
of 6 in 8qln
Go back to
Tungsten Binding Sites List in 8qln
Tungsten binding site 3 out
of 6 in the Crystal Structure of An N-Terminal Fragment of Hcmv UL47
Mono view
Stereo pair view
|
A full contact list of Tungsten with other atoms in the W binding
site number 3 of Crystal Structure of An N-Terminal Fragment of Hcmv UL47 within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
A:W601
b:73.1
occ:1.00
|
W3
|
A:TEW601
|
0.0
|
73.1
|
1.0
|
O15
|
A:TEW601
|
1.7
|
89.5
|
1.0
|
O16
|
A:TEW601
|
1.7
|
59.4
|
1.0
|
O14
|
A:TEW601
|
1.9
|
82.6
|
1.0
|
O4
|
A:TEW601
|
2.0
|
66.8
|
1.0
|
O2
|
A:TEW601
|
2.3
|
85.2
|
1.0
|
O13
|
A:TEW601
|
2.3
|
78.2
|
1.0
|
TE1
|
A:TEW601
|
3.3
|
68.6
|
1.0
|
W6
|
A:TEW601
|
3.3
|
67.4
|
1.0
|
W1
|
A:TEW601
|
3.3
|
72.2
|
1.0
|
NH2
|
A:ARG315
|
3.6
|
71.6
|
1.0
|
O5
|
A:TEW601
|
3.7
|
86.8
|
1.0
|
O31
|
A:TEW601
|
3.7
|
66.1
|
1.0
|
O11
|
A:TEW601
|
3.8
|
81.9
|
1.0
|
O1
|
A:TEW601
|
3.8
|
79.3
|
1.0
|
CD
|
A:ARG346
|
3.9
|
68.9
|
1.0
|
CG
|
A:ARG346
|
4.2
|
74.3
|
1.0
|
O6
|
A:TEW601
|
4.6
|
81.7
|
1.0
|
O23
|
A:TEW601
|
4.6
|
69.2
|
1.0
|
CZ
|
A:ARG315
|
4.6
|
71.2
|
1.0
|
NH1
|
A:ARG346
|
4.6
|
68.7
|
1.0
|
NE
|
A:ARG315
|
4.6
|
75.5
|
1.0
|
O20
|
A:TEW601
|
4.7
|
76.5
|
1.0
|
O3
|
A:TEW601
|
4.8
|
80.5
|
1.0
|
O7
|
A:TEW601
|
4.8
|
89.9
|
1.0
|
O12
|
A:TEW601
|
4.9
|
81.2
|
1.0
|
|
Tungsten binding site 4 out
of 6 in 8qln
Go back to
Tungsten Binding Sites List in 8qln
Tungsten binding site 4 out
of 6 in the Crystal Structure of An N-Terminal Fragment of Hcmv UL47
Mono view
Stereo pair view
|
A full contact list of Tungsten with other atoms in the W binding
site number 4 of Crystal Structure of An N-Terminal Fragment of Hcmv UL47 within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
A:W601
b:75.2
occ:1.00
|
W4
|
A:TEW601
|
0.0
|
75.2
|
1.0
|
O18
|
A:TEW601
|
1.7
|
80.4
|
1.0
|
O19
|
A:TEW601
|
1.7
|
64.0
|
1.0
|
O10
|
A:TEW601
|
1.9
|
87.3
|
1.0
|
O17
|
A:TEW601
|
2.0
|
74.2
|
1.0
|
O12
|
A:TEW601
|
2.3
|
81.2
|
1.0
|
O7
|
A:TEW601
|
2.3
|
89.9
|
1.0
|
W5
|
A:TEW601
|
3.3
|
65.8
|
1.0
|
W2
|
A:TEW601
|
3.3
|
79.4
|
1.0
|
TE1
|
A:TEW601
|
3.3
|
68.6
|
1.0
|
O9
|
A:TEW601
|
3.7
|
85.3
|
1.0
|
O21
|
A:TEW601
|
3.7
|
75.9
|
1.0
|
O11
|
A:TEW601
|
3.7
|
81.9
|
1.0
|
O1
|
A:TEW601
|
3.9
|
79.3
|
1.0
|
NH2
|
A:ARG337
|
4.1
|
64.8
|
1.0
|
CB
|
A:SER344
|
4.2
|
68.9
|
1.0
|
OG
|
A:SER344
|
4.3
|
64.3
|
1.0
|
O8
|
A:TEW601
|
4.6
|
87.7
|
1.0
|
O22
|
A:TEW601
|
4.6
|
73.4
|
1.0
|
O20
|
A:TEW601
|
4.7
|
76.5
|
1.0
|
O3
|
A:TEW601
|
4.8
|
80.5
|
1.0
|
O2
|
A:TEW601
|
4.9
|
85.2
|
1.0
|
N
|
A:SER344
|
4.9
|
69.9
|
1.0
|
O13
|
A:TEW601
|
4.9
|
78.2
|
1.0
|
|
Tungsten binding site 5 out
of 6 in 8qln
Go back to
Tungsten Binding Sites List in 8qln
Tungsten binding site 5 out
of 6 in the Crystal Structure of An N-Terminal Fragment of Hcmv UL47
Mono view
Stereo pair view
|
A full contact list of Tungsten with other atoms in the W binding
site number 5 of Crystal Structure of An N-Terminal Fragment of Hcmv UL47 within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
A:W601
b:65.8
occ:1.00
|
W5
|
A:TEW601
|
0.0
|
65.8
|
1.0
|
O22
|
A:TEW601
|
1.7
|
73.4
|
1.0
|
O21
|
A:TEW601
|
1.7
|
75.9
|
1.0
|
O17
|
A:TEW601
|
1.9
|
74.2
|
1.0
|
O20
|
A:TEW601
|
1.9
|
76.5
|
1.0
|
O11
|
A:TEW601
|
2.2
|
81.9
|
1.0
|
O12
|
A:TEW601
|
2.3
|
81.2
|
1.0
|
W4
|
A:TEW601
|
3.3
|
75.2
|
1.0
|
W6
|
A:TEW601
|
3.3
|
67.4
|
1.0
|
TE1
|
A:TEW601
|
3.3
|
68.6
|
1.0
|
O23
|
A:TEW601
|
3.6
|
69.2
|
1.0
|
O18
|
A:TEW601
|
3.7
|
80.4
|
1.0
|
NH2
|
A:ARG337
|
3.7
|
64.8
|
1.0
|
OG
|
A:SER344
|
3.7
|
64.3
|
1.0
|
O7
|
A:TEW601
|
3.8
|
89.9
|
1.0
|
O13
|
A:TEW601
|
3.8
|
78.2
|
1.0
|
NH1
|
A:ARG337
|
3.9
|
71.6
|
1.0
|
CZ
|
A:ARG337
|
4.2
|
70.1
|
1.0
|
CG1
|
A:ILE316
|
4.3
|
64.8
|
1.0
|
CB
|
A:ALA347
|
4.4
|
61.7
|
1.0
|
O19
|
A:TEW601
|
4.5
|
64.0
|
1.0
|
N
|
A:ILE316
|
4.5
|
70.1
|
1.0
|
O31
|
A:TEW601
|
4.6
|
66.1
|
1.0
|
CB
|
A:SER344
|
4.6
|
68.9
|
1.0
|
N
|
A:SER344
|
4.6
|
69.9
|
1.0
|
CB
|
A:ILE316
|
4.7
|
56.5
|
1.0
|
CG
|
A:ARG315
|
4.7
|
64.5
|
1.0
|
O10
|
A:TEW601
|
4.7
|
87.3
|
1.0
|
O14
|
A:TEW601
|
4.7
|
82.6
|
1.0
|
CG2
|
A:VAL343
|
4.8
|
75.2
|
1.0
|
O2
|
A:TEW601
|
4.9
|
85.2
|
1.0
|
O1
|
A:TEW601
|
5.0
|
79.3
|
1.0
|
NE
|
A:ARG315
|
5.0
|
75.5
|
1.0
|
CD
|
A:ARG315
|
5.0
|
69.3
|
1.0
|
|
Tungsten binding site 6 out
of 6 in 8qln
Go back to
Tungsten Binding Sites List in 8qln
Tungsten binding site 6 out
of 6 in the Crystal Structure of An N-Terminal Fragment of Hcmv UL47
Mono view
Stereo pair view
|
A full contact list of Tungsten with other atoms in the W binding
site number 6 of Crystal Structure of An N-Terminal Fragment of Hcmv UL47 within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
A:W601
b:67.4
occ:1.00
|
W6
|
A:TEW601
|
0.0
|
67.4
|
1.0
|
O31
|
A:TEW601
|
1.7
|
66.1
|
1.0
|
O23
|
A:TEW601
|
1.7
|
69.2
|
1.0
|
O14
|
A:TEW601
|
1.9
|
82.6
|
1.0
|
O20
|
A:TEW601
|
1.9
|
76.5
|
1.0
|
O13
|
A:TEW601
|
2.3
|
78.2
|
1.0
|
O11
|
A:TEW601
|
2.3
|
81.9
|
1.0
|
W5
|
A:TEW601
|
3.3
|
65.8
|
1.0
|
W3
|
A:TEW601
|
3.3
|
73.1
|
1.0
|
TE1
|
A:TEW601
|
3.3
|
68.6
|
1.0
|
O22
|
A:TEW601
|
3.6
|
73.4
|
1.0
|
O16
|
A:TEW601
|
3.8
|
59.4
|
1.0
|
O2
|
A:TEW601
|
3.8
|
85.2
|
1.0
|
O12
|
A:TEW601
|
3.8
|
81.2
|
1.0
|
NE
|
A:ARG315
|
4.0
|
75.5
|
1.0
|
OG
|
A:SER317
|
4.1
|
64.9
|
1.0
|
O
|
A:HOH721
|
4.2
|
61.8
|
1.0
|
CB
|
A:SER317
|
4.3
|
61.0
|
1.0
|
CA
|
A:ALA347
|
4.4
|
62.8
|
1.0
|
N
|
A:SER317
|
4.4
|
67.1
|
1.0
|
NH2
|
A:ARG315
|
4.5
|
71.6
|
1.0
|
OG
|
A:SER344
|
4.5
|
64.3
|
1.0
|
CB
|
A:ALA347
|
4.5
|
61.7
|
1.0
|
O21
|
A:TEW601
|
4.5
|
75.9
|
1.0
|
O15
|
A:TEW601
|
4.6
|
89.5
|
1.0
|
CG
|
A:ARG346
|
4.7
|
74.3
|
1.0
|
CG
|
A:ARG315
|
4.7
|
64.5
|
1.0
|
CZ
|
A:ARG315
|
4.7
|
71.2
|
1.0
|
N
|
A:ALA347
|
4.7
|
63.0
|
1.0
|
O17
|
A:TEW601
|
4.7
|
74.2
|
1.0
|
O
|
A:ARG346
|
4.7
|
61.7
|
1.0
|
O4
|
A:TEW601
|
4.8
|
66.8
|
1.0
|
O7
|
A:TEW601
|
4.8
|
89.9
|
1.0
|
CD
|
A:ARG315
|
4.9
|
69.3
|
1.0
|
C
|
A:ARG346
|
4.9
|
65.3
|
1.0
|
CB
|
A:ILE316
|
4.9
|
56.5
|
1.0
|
O1
|
A:TEW601
|
4.9
|
79.3
|
1.0
|
|
Reference:
C.L.Rehfeld,
T.F.Reubold,
S.Eschenburg.
Crystal Structure of An N-Terminal Fragment of Hcmv UL47 To Be Published.
Page generated: Thu Oct 31 23:18:17 2024
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