Tungsten in PDB 7vw6: Cryo-Em Structure of Formate Dehydrogenase 1 From Methylorubrum Extorquens AM1

All present enzymatic activity of Cryo-Em Structure of Formate Dehydrogenase 1 From Methylorubrum Extorquens AM1:
1.17.1.9; 1.2.1.2;

The structure of Cryo-Em Structure of Formate Dehydrogenase 1 From Methylorubrum Extorquens AM1 also contains other interesting chemical elements:

Iron

(Fe)

20 atoms

The binding sites of Tungsten atom in the Cryo-Em Structure of Formate Dehydrogenase 1 From Methylorubrum Extorquens AM1 (pdb code 7vw6). This binding sites where shown within 5.0 Angstroms radius around Tungsten atom.
In total only one binding site of Tungsten was determined in the Cryo-Em Structure of Formate Dehydrogenase 1 From Methylorubrum Extorquens AM1, PDB code: 7vw6:

Tungsten binding site 1 out of 1 in the Cryo-Em Structure of Formate Dehydrogenase 1 From Methylorubrum Extorquens AM1


Mono view


Stereo pair view

A full contact list of Tungsten with other atoms in the W binding site number 1 of Cryo-Em Structure of Formate Dehydrogenase 1 From Methylorubrum Extorquens AM1 within 5.0Å range: probe atom residue distance (Å) B Occ A:W1007 b:44.7 occ:1.00 S13 A:MGD1005 2.4 19.5 1.0 S13 A:MGD1006 2.4 15.4 1.0 S12 A:MGD1006 2.4 15.4 1.0 UNK A:UNX1008 2.5 13.5 1.0 S12 A:MGD1005 2.6 19.5 1.0 SG A:CYS436 2.8 18.6 1.0 CB A:CYS436 3.2 18.6 1.0 C13 A:MGD1005 3.4 19.5 1.0 C12 A:MGD1006 3.4 15.4 1.0 C13 A:MGD1006 3.4 15.4 1.0 C12 A:MGD1005 3.5 19.5 1.0 NH2 A:ARG875 4.0 15.9 1.0 CA A:CYS436 4.2 18.6 1.0 CA A:GLY631 4.4 14.3 1.0 NE2 A:HIS881 4.6 16.9 1.0 N A:GLN632 4.7 14.6 1.0 CG A:GLN632 4.7 14.6 1.0 C14 A:MGD1005 4.8 19.5 1.0 C11 A:MGD1006 4.9 15.4 1.0 C14 A:MGD1006 4.9 15.4 1.0 N A:GLY631 4.9 14.3 1.0 C11 A:MGD1005 4.9 19.5 1.0 SD A:MET594 4.9 16.4 1.0 C A:GLY631 5.0 14.3 1.0 N A:CYS436 5.0 18.6 1.0

T.Yoshikawa, F.Makino, T.Miyata, Y.Suzuki, H.Tanaka, K.Namba, K.Kano, K.Sowa, Y.Kitazumi, O.Shirai. Multiple Electron Transfer Pathways of Tungsten-Containing Formate Dehydrogenase in Direct Electron Transfer-Type Bioelectrocatalysis. Chem.Commun.(Camb.) V. 58 6478 2022.
ISSN: ESSN 1364-548X
PubMed: 35535582
DOI: 10.1039/D2CC01541B