Tungsten in PDB 7t5a: Crystal Structure of the Molybdate-Binding Periplasmic Protein Moda From the Bacteria Pseudomonsa Aeruginosa in Tungstate-Bound Form

The structure of Crystal Structure of the Molybdate-Binding Periplasmic Protein Moda From the Bacteria Pseudomonsa Aeruginosa in Tungstate-Bound Form, PDB code: 7t5a was solved by D.H.Y.Ngu, Z.Luo, B.Y.J.Lim, B.Kobe, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	43.23 / 2.16
Space group	P 1 21 1
Cell size a, b, c (Å), α, β, γ (°)	46.115, 40.977, 111.038, 90, 92.53, 90
R / Rfree (%)	23 / 26.4

The binding sites of Tungsten atom in the Crystal Structure of the Molybdate-Binding Periplasmic Protein Moda From the Bacteria Pseudomonsa Aeruginosa in Tungstate-Bound Form (pdb code 7t5a). This binding sites where shown within 5.0 Angstroms radius around Tungsten atom.
In total 2 binding sites of Tungsten where determined in the Crystal Structure of the Molybdate-Binding Periplasmic Protein Moda From the Bacteria Pseudomonsa Aeruginosa in Tungstate-Bound Form, PDB code: 7t5a:
Jump to Tungsten binding site number: 1; 2;

Tungsten binding site 1 out of 2 in the Crystal Structure of the Molybdate-Binding Periplasmic Protein Moda From the Bacteria Pseudomonsa Aeruginosa in Tungstate-Bound Form


Mono view


Stereo pair view

A full contact list of Tungsten with other atoms in the W binding site number 1 of Crystal Structure of the Molybdate-Binding Periplasmic Protein Moda From the Bacteria Pseudomonsa Aeruginosa in Tungstate-Bound Form within 5.0Å range: probe atom residue distance (Å) B Occ A:W301 b:23.3 occ:1.00 W A:WO4301 0.0 23.3 1.0 O3 A:WO4301 1.7 22.0 1.0 O1 A:WO4301 1.7 21.4 1.0 O4 A:WO4301 1.8 21.0 1.0 O2 A:WO4301 1.8 26.1 1.0 HD2 A:PRO140 3.0 20.1 1.0 HB1 A:ALA139 3.1 21.9 1.0 HG22 A:ILE168 3.2 13.6 1.0 HB1 A:ALA31 3.3 32.1 1.0 HB2 A:ALA79 3.5 18.6 1.0 HA A:ALA139 3.5 21.3 1.0 HB3 A:ALA79 3.6 18.6 1.0 H A:ILE168 3.6 16.1 1.0 HD22 A:ASN33 3.6 17.0 1.0 HB A:ILE168 3.6 14.7 1.0 HD1 A:TYR141 3.6 19.8 1.0 H A:ALA32 3.6 27.1 1.0 H A:ASN33 3.7 11.0 1.0 HA A:ALA59 3.7 25.7 1.0 HG1 A:THR60 3.7 19.3 1.0 H A:THR60 3.8 25.5 1.0 HB3 A:ALA32 3.8 16.2 1.0 CB A:ALA139 3.8 14.6 1.0 CB A:ALA79 3.8 31.5 1.0 CD A:PRO140 3.8 19.4 1.0 H A:TYR141 3.9 17.2 1.0 HB1 A:ALA79 3.9 18.6 1.0 CG2 A:ILE168 4.0 15.7 1.0 HB2 A:ALA139 4.0 21.9 1.0 HG21 A:ILE168 4.0 13.6 1.0 HB2 A:TYR141 4.0 10.4 1.0 HD3 A:PRO140 4.1 20.1 1.0 CA A:ALA139 4.1 15.2 1.0 HB3 A:ASN33 4.1 15.3 1.0 N A:ALA32 4.2 20.6 1.0 CB A:ALA31 4.3 25.0 1.0 HB2 A:ASN167 4.3 13.3 1.0 CB A:ILE168 4.3 15.2 1.0 N A:PRO140 4.3 19.3 1.0 N A:ILE168 4.4 18.6 1.0 ND2 A:ASN33 4.4 18.6 1.0 CD1 A:TYR141 4.4 22.5 1.0 N A:ASN33 4.5 19.4 1.0 C A:ALA139 4.5 15.6 1.0 OG1 A:THR60 4.5 23.2 1.0 N A:THR60 4.6 20.4 1.0 CB A:ALA32 4.6 21.4 1.0 HB3 A:ALA139 4.7 21.9 1.0 CA A:ALA59 4.7 24.5 1.0 HB2 A:ALA31 4.7 32.1 1.0 HA A:ASN167 4.7 15.9 1.0 HB3 A:ALA31 4.7 32.1 1.0 N A:TYR141 4.7 22.9 1.0 HA A:ALA31 4.7 17.3 1.0 O A:GLY58 4.8 19.3 1.0 HG23 A:ILE168 4.8 13.6 1.0 C A:ALA31 4.8 25.6 1.0 CA A:ALA31 4.9 25.0 1.0 CA A:ALA32 4.9 20.8 1.0 HD21 A:ASN33 4.9 17.0 1.0 HB2 A:ALA32 4.9 16.2 1.0 CB A:TYR141 4.9 21.1 1.0 CB A:ASN33 5.0 18.6 1.0

Tungsten binding site 2 out of 2 in the Crystal Structure of the Molybdate-Binding Periplasmic Protein Moda From the Bacteria Pseudomonsa Aeruginosa in Tungstate-Bound Form


Mono view


Stereo pair view

A full contact list of Tungsten with other atoms in the W binding site number 2 of Crystal Structure of the Molybdate-Binding Periplasmic Protein Moda From the Bacteria Pseudomonsa Aeruginosa in Tungstate-Bound Form within 5.0Å range: probe atom residue distance (Å) B Occ B:W301 b:23.3 occ:1.00 W B:WO4301 0.0 23.3 1.0 O3 B:WO4301 1.7 22.0 1.0 O1 B:WO4301 1.7 21.4 1.0 O4 B:WO4301 1.8 21.0 1.0 O2 B:WO4301 1.8 26.1 1.0 HD2 B:PRO140 3.2 17.4 1.0 HB1 B:ALA31 3.3 21.1 1.0 HB1 B:ALA139 3.4 19.7 1.0 HB2 B:ALA79 3.5 16.1 1.0 HB B:ILE168 3.5 12.2 1.0 HB3 B:ALA79 3.6 16.1 1.0 H B:ALA32 3.6 24.1 1.0 H B:ILE168 3.6 19.7 1.0 H B:ASN33 3.6 22.3 1.0 HD1 B:TYR141 3.6 24.2 1.0 HB3 B:ALA32 3.6 26.3 1.0 HD22 B:ASN33 3.7 20.6 1.0 HA B:ALA139 3.7 22.5 1.0 HG1 B:THR60 3.7 18.2 1.0 HG21 B:ILE168 3.7 24.2 1.0 HA B:ALA59 3.8 26.6 1.0 H B:THR60 3.8 20.4 1.0 HG22 B:ILE168 3.8 24.2 1.0 H B:TYR141 3.8 23.0 1.0 CB B:ALA79 3.8 17.4 1.0 HB1 B:ALA79 3.9 16.1 1.0 HB2 B:TYR141 4.0 15.6 1.0 CG2 B:ILE168 4.1 15.8 1.0 CB B:ALA139 4.1 20.5 1.0 HB3 B:ASN33 4.1 20.4 1.0 CD B:PRO140 4.1 20.3 1.0 N B:ALA32 4.1 18.9 1.0 HB2 B:ASN167 4.2 22.1 1.0 CB B:ILE168 4.2 15.5 1.0 CA B:ALA139 4.3 19.3 1.0 HB2 B:ALA139 4.3 19.7 1.0 CB B:ALA31 4.3 17.6 1.0 N B:ASN33 4.4 21.1 1.0 CD1 B:TYR141 4.4 22.3 1.0 N B:PRO140 4.4 18.6 1.0 N B:ILE168 4.4 16.9 1.0 OG1 B:THR60 4.5 22.2 1.0 CB B:ALA32 4.5 18.6 1.0 ND2 B:ASN33 4.5 21.5 1.0 C B:ALA139 4.6 17.4 1.0 N B:THR60 4.6 21.1 1.0 HD3 B:PRO140 4.6 17.4 1.0 N B:TYR141 4.7 20.1 1.0 CA B:ALA59 4.7 18.9 1.0 HA B:ALA31 4.7 21.0 1.0 HB2 B:ALA31 4.8 21.1 1.0 HB3 B:ALA31 4.8 21.1 1.0 CA B:ALA32 4.8 19.0 1.0 HB2 B:ALA32 4.8 26.3 1.0 C B:ALA31 4.8 17.4 1.0 HA B:ASN167 4.8 21.7 1.0 O B:GLY58 4.8 18.5 1.0 HB2 B:PRO140 4.9 22.7 1.0 CB B:TYR141 4.9 20.9 1.0 CA B:ALA31 4.9 17.5 1.0 HB3 B:ALA139 4.9 19.7 1.0 CB B:ASN33 4.9 20.9 1.0 HD21 B:ASN33 5.0 20.6 1.0 CA B:ILE168 5.0 16.1 1.0

E.A.Maunders, D.H.Y.Ngu, K.Ganio, S.I.Hossain, B.Y.J.Lim, M.G.Leeming, Z.Luo, A.Tan, E.Deplazes, B.Kobe, C.A.Mcdevitt. The Impact of Chromate on Pseudomonas Aeruginosa Molybdenum Homeostasis. Front Microbiol V. 13 03146 2022.
ISSN: ESSN 1664-302X
PubMed: 35685933
DOI: 10.3389/FMICB.2022.903146