Tungsten in PDB 7rcj: Crystal Structure of Znua From Citrobacter Koseri

The structure of Crystal Structure of Znua From Citrobacter Koseri, PDB code: 7rcj was solved by E.T.Yukl, E.L.Yekwa, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	47.47 / 3.15
Space group	P 1 2 1
Cell size a, b, c (Å), α, β, γ (°)	122.246, 81.667, 126.555, 90, 112.99, 90
R / Rfree (%)	21.7 / 25.4

The structure of Crystal Structure of Znua From Citrobacter Koseri also contains other interesting chemical elements:

Tellurium	(Te)	3 atoms
Zinc	(Zn)	6 atoms

Pages:

>>> Page 1 <<< Page 2, Binding sites: 11 - 18;

Binding sites:

The binding sites of Tungsten atom in the Crystal Structure of Znua From Citrobacter Koseri (pdb code 7rcj). This binding sites where shown within 5.0 Angstroms radius around Tungsten atom.
In total 18 binding sites of Tungsten where determined in the Crystal Structure of Znua From Citrobacter Koseri, PDB code: 7rcj:
Jump to Tungsten binding site number: 1; 2; 3; 4; 5; 6; 7; 8; 9; 10;

Tungsten binding site 1 out of 18 in the Crystal Structure of Znua From Citrobacter Koseri


Mono view


Stereo pair view

A full contact list of Tungsten with other atoms in the W binding site number 1 of Crystal Structure of Znua From Citrobacter Koseri within 5.0Å range: probe atom residue distance (Å) B Occ B:W402 b:346.3 occ:0.25 W1 B:TEW402 0.0 346.3 0.2 O6 B:TEW402 1.7 350.1 0.2 O5 B:TEW402 1.7 344.5 0.2 O4 B:TEW402 1.9 344.2 0.2 O3 B:TEW402 2.0 350.7 0.2 O1 B:TEW402 2.2 356.5 0.2 O2 B:TEW402 2.3 353.6 0.2 TE1 B:TEW402 3.3 382.2 0.2 W2 B:TEW402 3.3 347.0 0.2 W3 B:TEW402 3.3 333.6 0.2 O8 B:TEW402 3.7 345.1 0.2 O15 B:TEW402 3.8 332.0 0.2 O7 B:TEW402 3.8 356.1 0.2 O13 B:TEW402 3.8 349.6 0.2 O16 B:TEW402 4.6 327.3 0.2 O9 B:TEW402 4.6 335.9 0.2 O10 B:TEW402 4.8 346.1 0.2 O14 B:TEW402 4.8 332.9 0.2 O12 B:TEW402 4.9 353.9 0.2 O11 B:TEW402 4.9 350.4 0.2

Tungsten binding site 2 out of 18 in the Crystal Structure of Znua From Citrobacter Koseri


Mono view


Stereo pair view

A full contact list of Tungsten with other atoms in the W binding site number 2 of Crystal Structure of Znua From Citrobacter Koseri within 5.0Å range: probe atom residue distance (Å) B Occ B:W402 b:347.0 occ:0.25 W2 B:TEW402 0.0 347.0 0.2 O9 B:TEW402 1.7 335.9 0.2 O8 B:TEW402 1.7 345.1 0.2 O10 B:TEW402 1.9 346.1 0.2 O3 B:TEW402 1.9 350.7 0.2 O7 B:TEW402 2.2 356.1 0.2 O1 B:TEW402 2.3 356.5 0.2 W4 B:TEW402 3.3 344.9 0.2 W1 B:TEW402 3.3 346.3 0.2 TE1 B:TEW402 3.3 382.2 0.2 O19 B:TEW402 3.7 341.8 0.2 O6 B:TEW402 3.7 350.1 0.2 O12 B:TEW402 3.8 353.9 0.2 O2 B:TEW402 3.9 353.6 0.2 O5 B:TEW402 4.6 344.5 0.2 O18 B:TEW402 4.6 338.9 0.2 O17 B:TEW402 4.7 343.4 0.2 O4 B:TEW402 4.8 344.2 0.2 O11 B:TEW402 4.9 350.4 0.2 O13 B:TEW402 5.0 349.6 0.2

Tungsten binding site 3 out of 18 in the Crystal Structure of Znua From Citrobacter Koseri


Mono view


Stereo pair view

A full contact list of Tungsten with other atoms in the W binding site number 3 of Crystal Structure of Znua From Citrobacter Koseri within 5.0Å range: probe atom residue distance (Å) B Occ B:W402 b:333.6 occ:0.25 W3 B:TEW402 0.0 333.6 0.2 O15 B:TEW402 1.7 332.0 0.2 O16 B:TEW402 1.7 327.3 0.2 O14 B:TEW402 1.9 332.9 0.2 O4 B:TEW402 2.0 344.2 0.2 O2 B:TEW402 2.3 353.6 0.2 O13 B:TEW402 2.3 349.6 0.2 W6 B:TEW402 3.3 332.5 0.2 TE1 B:TEW402 3.3 382.2 0.2 W1 B:TEW402 3.3 346.3 0.2 O31 B:TEW402 3.7 324.7 0.2 O5 B:TEW402 3.8 344.5 0.2 O11 B:TEW402 3.8 350.4 0.2 O1 B:TEW402 3.9 356.5 0.2 O23 B:TEW402 4.5 333.0 0.2 O6 B:TEW402 4.6 350.1 0.2 O20 B:TEW402 4.7 337.8 0.2 O3 B:TEW402 4.8 350.7 0.2 O7 B:TEW402 4.9 356.1 0.2 O12 B:TEW402 4.9 353.9 0.2

Tungsten binding site 4 out of 18 in the Crystal Structure of Znua From Citrobacter Koseri


Mono view


Stereo pair view

A full contact list of Tungsten with other atoms in the W binding site number 4 of Crystal Structure of Znua From Citrobacter Koseri within 5.0Å range: probe atom residue distance (Å) B Occ B:W402 b:344.9 occ:0.25 W4 B:TEW402 0.0 344.9 0.2 O18 B:TEW402 1.7 338.9 0.2 O19 B:TEW402 1.7 341.8 0.2 O10 B:TEW402 1.9 346.1 0.2 O17 B:TEW402 2.0 343.4 0.2 O12 B:TEW402 2.3 353.9 0.2 O7 B:TEW402 2.3 356.1 0.2 W2 B:TEW402 3.3 347.0 0.2 W5 B:TEW402 3.4 333.2 0.2 TE1 B:TEW402 3.4 382.2 0.2 O9 B:TEW402 3.7 335.9 0.2 O21 B:TEW402 3.8 337.4 0.2 O1 B:TEW402 3.8 356.5 0.2 O11 B:TEW402 3.9 350.4 0.2 O8 B:TEW402 4.5 345.1 0.2 O22 B:TEW402 4.6 337.8 0.2 O3 B:TEW402 4.8 350.7 0.2 O20 B:TEW402 4.8 337.8 0.2 O13 B:TEW402 5.0 349.6 0.2 O2 B:TEW402 5.0 353.6 0.2

Tungsten binding site 5 out of 18 in the Crystal Structure of Znua From Citrobacter Koseri


Mono view


Stereo pair view

A full contact list of Tungsten with other atoms in the W binding site number 5 of Crystal Structure of Znua From Citrobacter Koseri within 5.0Å range: probe atom residue distance (Å) B Occ B:W402 b:333.2 occ:0.25 W5 B:TEW402 0.0 333.2 0.2 O22 B:TEW402 1.7 337.8 0.2 O21 B:TEW402 1.7 337.4 0.2 O17 B:TEW402 1.9 343.4 0.2 O20 B:TEW402 2.0 337.8 0.2 O11 B:TEW402 2.3 350.4 0.2 O12 B:TEW402 2.3 353.9 0.2 TE1 B:TEW402 3.3 382.2 0.2 W6 B:TEW402 3.3 332.5 0.2 W4 B:TEW402 3.4 344.9 0.2 O23 B:TEW402 3.7 333.0 0.2 O18 B:TEW402 3.8 338.9 0.2 O7 B:TEW402 3.8 356.1 0.2 O13 B:TEW402 3.8 349.6 0.2 NZ B:LYS91 4.6 196.9 1.0 O19 B:TEW402 4.6 341.8 0.2 O31 B:TEW402 4.6 324.7 0.2 O14 B:TEW402 4.7 332.9 0.2 O10 B:TEW402 4.8 346.1 0.2 O1 B:TEW402 4.9 356.5 0.2 O2 B:TEW402 4.9 353.6 0.2

Tungsten binding site 6 out of 18 in the Crystal Structure of Znua From Citrobacter Koseri


Mono view


Stereo pair view

A full contact list of Tungsten with other atoms in the W binding site number 6 of Crystal Structure of Znua From Citrobacter Koseri within 5.0Å range: probe atom residue distance (Å) B Occ B:W402 b:332.5 occ:0.25 W6 B:TEW402 0.0 332.5 0.2 O31 B:TEW402 1.7 324.7 0.2 O23 B:TEW402 1.7 333.0 0.2 O14 B:TEW402 1.9 332.9 0.2 O20 B:TEW402 1.9 337.8 0.2 O13 B:TEW402 2.2 349.6 0.2 O11 B:TEW402 2.3 350.4 0.2 W3 B:TEW402 3.3 333.6 0.2 TE1 B:TEW402 3.3 382.2 0.2 W5 B:TEW402 3.3 333.2 0.2 O16 B:TEW402 3.7 327.3 0.2 O22 B:TEW402 3.7 337.8 0.2 O2 B:TEW402 3.8 353.6 0.2 O12 B:TEW402 3.9 353.9 0.2 CD B:LYS91 4.5 174.4 1.0 O21 B:TEW402 4.5 337.4 0.2 O15 B:TEW402 4.6 332.0 0.2 NZ B:LYS91 4.7 196.9 1.0 O4 B:TEW402 4.7 344.2 0.2 O17 B:TEW402 4.8 343.4 0.2 O1 B:TEW402 4.9 356.5 0.2 O7 B:TEW402 4.9 356.1 0.2

Tungsten binding site 7 out of 18 in the Crystal Structure of Znua From Citrobacter Koseri


Mono view


Stereo pair view

A full contact list of Tungsten with other atoms in the W binding site number 7 of Crystal Structure of Znua From Citrobacter Koseri within 5.0Å range: probe atom residue distance (Å) B Occ D:W402 b:339.9 occ:0.25 W1 D:TEW402 0.0 339.9 0.2 O6 D:TEW402 1.7 332.5 0.2 O5 D:TEW402 1.7 335.0 0.2 O4 D:TEW402 1.9 338.6 0.2 O3 D:TEW402 1.9 342.9 0.2 O1 D:TEW402 2.3 351.1 0.2 O2 D:TEW402 2.3 345.0 0.2 W2 D:TEW402 3.3 346.7 0.2 TE1 D:TEW402 3.3 370.5 0.2 W3 D:TEW402 3.4 320.4 0.2 O8 D:TEW402 3.7 338.1 0.2 O7 D:TEW402 3.8 349.9 0.2 O15 D:TEW402 3.8 317.0 0.2 O13 D:TEW402 3.9 340.7 0.2 O9 D:TEW402 4.6 347.0 0.2 O16 D:TEW402 4.6 312.5 0.2 O10 D:TEW402 4.8 341.1 0.2 O14 D:TEW402 4.8 326.1 0.2 O12 D:TEW402 4.9 343.1 0.2 O11 D:TEW402 5.0 342.9 0.2

Tungsten binding site 8 out of 18 in the Crystal Structure of Znua From Citrobacter Koseri


Mono view


Stereo pair view

A full contact list of Tungsten with other atoms in the W binding site number 8 of Crystal Structure of Znua From Citrobacter Koseri within 5.0Å range: probe atom residue distance (Å) B Occ D:W402 b:346.7 occ:0.25 W2 D:TEW402 0.0 346.7 0.2 O9 D:TEW402 1.7 347.0 0.2 O8 D:TEW402 1.7 338.1 0.2 O10 D:TEW402 1.9 341.1 0.2 O3 D:TEW402 1.9 342.9 0.2 O7 D:TEW402 2.3 349.9 0.2 O1 D:TEW402 2.3 351.1 0.2 W4 D:TEW402 3.3 326.4 0.2 W1 D:TEW402 3.3 339.9 0.2 TE1 D:TEW402 3.4 370.5 0.2 O6 D:TEW402 3.7 332.5 0.2 O19 D:TEW402 3.7 326.5 0.2 O12 D:TEW402 3.8 343.1 0.2 O2 D:TEW402 3.9 345.0 0.2 O5 D:TEW402 4.5 335.0 0.2 O18 D:TEW402 4.6 325.3 0.2 O17 D:TEW402 4.8 332.5 0.2 O4 D:TEW402 4.8 338.6 0.2 O11 D:TEW402 4.9 342.9 0.2 O13 D:TEW402 5.0 340.7 0.2

Tungsten binding site 9 out of 18 in the Crystal Structure of Znua From Citrobacter Koseri


Mono view


Stereo pair view

A full contact list of Tungsten with other atoms in the W binding site number 9 of Crystal Structure of Znua From Citrobacter Koseri within 5.0Å range: probe atom residue distance (Å) B Occ D:W402 b:320.4 occ:0.25 W3 D:TEW402 0.0 320.4 0.2 O15 D:TEW402 1.7 317.0 0.2 O16 D:TEW402 1.7 312.5 0.2 O14 D:TEW402 1.9 326.1 0.2 O4 D:TEW402 2.0 338.6 0.2 O2 D:TEW402 2.3 345.0 0.2 O13 D:TEW402 2.3 340.7 0.2 W6 D:TEW402 3.3 329.9 0.2 TE1 D:TEW402 3.3 370.5 0.2 W1 D:TEW402 3.4 339.9 0.2 O31 D:TEW402 3.7 324.7 0.2 O5 D:TEW402 3.8 335.0 0.2 O1 D:TEW402 3.9 351.1 0.2 O11 D:TEW402 3.9 342.9 0.2 O23 D:TEW402 4.5 328.8 0.2 O6 D:TEW402 4.6 332.5 0.2 O20 D:TEW402 4.8 335.8 0.2 O3 D:TEW402 4.8 342.9 0.2 O7 D:TEW402 4.9 349.9 0.2 O12 D:TEW402 5.0 343.1 0.2

Tungsten binding site 10 out of 18 in the Crystal Structure of Znua From Citrobacter Koseri


Mono view


Stereo pair view

A full contact list of Tungsten with other atoms in the W binding site number 10 of Crystal Structure of Znua From Citrobacter Koseri within 5.0Å range: probe atom residue distance (Å) B Occ D:W402 b:326.4 occ:0.25 W4 D:TEW402 0.0 326.4 0.2 O18 D:TEW402 1.7 325.3 0.2 O19 D:TEW402 1.7 326.5 0.2 O10 D:TEW402 1.9 341.1 0.2 O17 D:TEW402 2.0 332.5 0.2 O12 D:TEW402 2.3 343.1 0.2 O7 D:TEW402 2.3 349.9 0.2 W2 D:TEW402 3.3 346.7 0.2 W5 D:TEW402 3.3 334.2 0.2 TE1 D:TEW402 3.3 370.5 0.2 O9 D:TEW402 3.7 347.0 0.2 O21 D:TEW402 3.8 333.4 0.2 O1 D:TEW402 3.8 351.1 0.2 O11 D:TEW402 3.9 342.9 0.2 O8 D:TEW402 4.6 338.1 0.2 O22 D:TEW402 4.6 331.6 0.2 O20 D:TEW402 4.8 335.8 0.2 O3 D:TEW402 4.8 342.9 0.2 O2 D:TEW402 4.9 345.0 0.2 O13 D:TEW402 5.0 340.7 0.2

E.L.Yekwa, F.A.Serrano, E.Yukl. Conformational Flexibility in the Zinc Solute-Binding Protein Znua. Acta Crystallogr.,Sect.F V. 78 128 2022.
ISSN: ESSN 2053-230X
PubMed: 35234138
DOI: 10.1107/S2053230X22001662