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Tungsten in PDB 7owz: Heterodimeric Murine Trna-Guanine Transglycosylase in Complex with Queuine and in the Presence of Anderson-Evans Type (Tew) and Strandberg Type Polyoxometalate (Pom)

Enzymatic activity of Heterodimeric Murine Trna-Guanine Transglycosylase in Complex with Queuine and in the Presence of Anderson-Evans Type (Tew) and Strandberg Type Polyoxometalate (Pom)

All present enzymatic activity of Heterodimeric Murine Trna-Guanine Transglycosylase in Complex with Queuine and in the Presence of Anderson-Evans Type (Tew) and Strandberg Type Polyoxometalate (Pom):
2.4.2.29;

Protein crystallography data

The structure of Heterodimeric Murine Trna-Guanine Transglycosylase in Complex with Queuine and in the Presence of Anderson-Evans Type (Tew) and Strandberg Type Polyoxometalate (Pom), PDB code: 7owz was solved by M.Sebastiani, A.Heine, K.Reuter, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 48.60 / 2.60
Space group P 62 2 2
Cell size a, b, c (Å), α, β, γ (°) 199.5, 199.5, 90.586, 90, 90, 120
R / Rfree (%) 21.4 / 23.9

Other elements in 7owz:

The structure of Heterodimeric Murine Trna-Guanine Transglycosylase in Complex with Queuine and in the Presence of Anderson-Evans Type (Tew) and Strandberg Type Polyoxometalate (Pom) also contains other interesting chemical elements:

Zinc (Zn) 2 atoms
Tellurium (Te) 2 atoms

Tungsten Binding Sites:

Pages:

>>> Page 1 <<< Page 2, Binding sites: 11 - 17;

Binding sites:

The binding sites of Tungsten atom in the Heterodimeric Murine Trna-Guanine Transglycosylase in Complex with Queuine and in the Presence of Anderson-Evans Type (Tew) and Strandberg Type Polyoxometalate (Pom) (pdb code 7owz). This binding sites where shown within 5.0 Angstroms radius around Tungsten atom.
In total 17 binding sites of Tungsten where determined in the Heterodimeric Murine Trna-Guanine Transglycosylase in Complex with Queuine and in the Presence of Anderson-Evans Type (Tew) and Strandberg Type Polyoxometalate (Pom), PDB code: 7owz:
Jump to Tungsten binding site number: 1; 2; 3; 4; 5; 6; 7; 8; 9; 10;

Tungsten binding site 1 out of 17 in 7owz

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Tungsten binding site 1 out of 17 in the Heterodimeric Murine Trna-Guanine Transglycosylase in Complex with Queuine and in the Presence of Anderson-Evans Type (Tew) and Strandberg Type Polyoxometalate (Pom)


Mono view


Stereo pair view

A full contact list of Tungsten with other atoms in the W binding site number 1 of Heterodimeric Murine Trna-Guanine Transglycosylase in Complex with Queuine and in the Presence of Anderson-Evans Type (Tew) and Strandberg Type Polyoxometalate (Pom) within 5.0Å range:
probe atom residue distance (Å) B Occ
A:W501

b:80.6
occ:0.43
 W1 A:TEW501 0.0 80.6 0.4
O6 A:TEW501 1.7 80.1 0.4
O5 A:TEW501 1.7 81.2 0.4
O4 A:TEW501 1.9 80.7 0.4
O3 A:TEW501 2.0 80.4 0.4
O1 A:TEW501 2.2 80.0 0.4
O2 A:TEW501 2.3 81.2 0.4
W2 A:TEW501 3.1 79.7 0.4
TE1 A:TEW501 3.2 80.6 0.4
W3 A:TEW501 3.3 81.3 0.4
O7 A:TEW501 3.6 80.2 0.4
O15 A:TEW501 3.7 81.8 0.4
O13 A:TEW501 3.9 80.7 0.4
O16 A:TEW501 4.0 81.0 0.4
NZ A:LYS162 4.1 63.8 1.0
O8 A:TEW501 4.2 79.1 0.4
O14 A:TEW501 4.4 81.8 0.4
O9 A:TEW501 4.5 79.5 0.4
NH2 A:ARG166 4.6 68.5 1.0
O10 A:TEW501 4.7 79.3 0.4
O12 A:TEW501 4.8 80.0 0.4
O11 A:TEW501 4.8 81.1 0.4

Tungsten binding site 2 out of 17 in 7owz

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Tungsten binding site 2 out of 17 in the Heterodimeric Murine Trna-Guanine Transglycosylase in Complex with Queuine and in the Presence of Anderson-Evans Type (Tew) and Strandberg Type Polyoxometalate (Pom)


Mono view


Stereo pair view

A full contact list of Tungsten with other atoms in the W binding site number 2 of Heterodimeric Murine Trna-Guanine Transglycosylase in Complex with Queuine and in the Presence of Anderson-Evans Type (Tew) and Strandberg Type Polyoxometalate (Pom) within 5.0Å range:
probe atom residue distance (Å) B Occ
A:W501

b:79.7
occ:0.43
 W2 A:TEW501 0.0 79.7 0.4
O9 A:TEW501 1.7 79.5 0.4
O8 A:TEW501 1.7 79.1 0.4
O3 A:TEW501 1.9 80.4 0.4
O10 A:TEW501 1.9 79.3 0.4
O7 A:TEW501 2.2 80.2 0.4
O1 A:TEW501 2.3 80.0 0.4
TE1 A:TEW501 3.1 80.6 0.4
W1 A:TEW501 3.1 80.6 0.4
W4 A:TEW501 3.1 79.5 0.4
O6 A:TEW501 3.5 80.1 0.4
O12 A:TEW501 3.5 80.0 0.4
O2 A:TEW501 3.8 81.2 0.4
NH2 A:ARG166 3.8 68.5 1.0
O19 A:TEW501 4.2 79.6 0.4
O5 A:TEW501 4.4 81.2 0.4
O18 A:TEW501 4.4 79.1 0.4
O4 A:TEW501 4.6 80.7 0.4
CG2 A:THR109 4.6 68.8 1.0
CB A:THR109 4.6 68.5 1.0
O11 A:TEW501 4.6 81.1 0.4
O13 A:TEW501 4.7 80.7 0.4
N A:SER110 4.7 68.7 1.0
O17 A:TEW501 4.8 80.2 0.4
CA A:THR109 4.8 67.4 1.0
NZ A:LYS162 4.8 63.8 1.0
CZ A:ARG166 4.9 65.8 1.0

Tungsten binding site 3 out of 17 in 7owz

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Tungsten binding site 3 out of 17 in the Heterodimeric Murine Trna-Guanine Transglycosylase in Complex with Queuine and in the Presence of Anderson-Evans Type (Tew) and Strandberg Type Polyoxometalate (Pom)


Mono view


Stereo pair view

A full contact list of Tungsten with other atoms in the W binding site number 3 of Heterodimeric Murine Trna-Guanine Transglycosylase in Complex with Queuine and in the Presence of Anderson-Evans Type (Tew) and Strandberg Type Polyoxometalate (Pom) within 5.0Å range:
probe atom residue distance (Å) B Occ
A:W501

b:81.3
occ:0.43
 W3 A:TEW501 0.0 81.3 0.4
O15 A:TEW501 1.7 81.8 0.4
O16 A:TEW501 1.7 81.0 0.4
O14 A:TEW501 1.9 81.8 0.4
O4 A:TEW501 2.0 80.7 0.4
O2 A:TEW501 2.2 81.2 0.4
O13 A:TEW501 2.3 80.7 0.4
W6 A:TEW501 3.1 81.4 0.4
TE1 A:TEW501 3.2 80.6 0.4
W1 A:TEW501 3.3 80.6 0.4
O31 A:TEW501 3.4 81.6 0.4
O1 A:TEW501 3.6 80.0 0.4
O5 A:TEW501 3.9 81.2 0.4
O23 A:TEW501 3.9 82.0 0.4
O11 A:TEW501 3.9 81.1 0.4
NZ A:LYS162 3.9 63.8 1.0
O20 A:TEW501 4.3 80.7 0.4
O6 A:TEW501 4.6 80.1 0.4
O3 A:TEW501 4.7 80.4 0.4
O7 A:TEW501 4.8 80.2 0.4
O12 A:TEW501 4.8 80.0 0.4
CE A:LYS162 4.8 62.4 1.0

Tungsten binding site 4 out of 17 in 7owz

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Tungsten binding site 4 out of 17 in the Heterodimeric Murine Trna-Guanine Transglycosylase in Complex with Queuine and in the Presence of Anderson-Evans Type (Tew) and Strandberg Type Polyoxometalate (Pom)


Mono view


Stereo pair view

A full contact list of Tungsten with other atoms in the W binding site number 4 of Heterodimeric Murine Trna-Guanine Transglycosylase in Complex with Queuine and in the Presence of Anderson-Evans Type (Tew) and Strandberg Type Polyoxometalate (Pom) within 5.0Å range:
probe atom residue distance (Å) B Occ
A:W501

b:79.5
occ:0.43
 W4 A:TEW501 0.0 79.5 0.4
O18 A:TEW501 1.7 79.1 0.4
O19 A:TEW501 1.7 79.6 0.4
O10 A:TEW501 1.9 79.3 0.4
O17 A:TEW501 2.0 80.2 0.4
O12 A:TEW501 2.3 80.0 0.4
O7 A:TEW501 2.3 80.2 0.4
W2 A:TEW501 3.1 79.7 0.4
TE1 A:TEW501 3.2 80.6 0.4
W5 A:TEW501 3.3 80.4 0.4
O11 A:TEW501 3.5 81.1 0.4
O9 A:TEW501 3.5 79.5 0.4
O8 A:TEW501 3.9 79.1 0.4
O1 A:TEW501 3.9 80.0 0.4
O21 A:TEW501 3.9 80.1 0.4
CB A:SER110 4.3 73.8 1.0
O3 A:TEW501 4.4 80.4 0.4
N A:SER110 4.5 68.7 1.0
O22 A:TEW501 4.6 81.0 0.4
O20 A:TEW501 4.7 80.7 0.4
O2 A:TEW501 4.7 81.2 0.4
O13 A:TEW501 4.8 80.7 0.4
CB A:THR109 4.9 68.5 1.0
CG A:LYS111 4.9 56.3 1.0
CA A:SER110 5.0 68.8 1.0

Tungsten binding site 5 out of 17 in 7owz

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Tungsten binding site 5 out of 17 in the Heterodimeric Murine Trna-Guanine Transglycosylase in Complex with Queuine and in the Presence of Anderson-Evans Type (Tew) and Strandberg Type Polyoxometalate (Pom)


Mono view


Stereo pair view

A full contact list of Tungsten with other atoms in the W binding site number 5 of Heterodimeric Murine Trna-Guanine Transglycosylase in Complex with Queuine and in the Presence of Anderson-Evans Type (Tew) and Strandberg Type Polyoxometalate (Pom) within 5.0Å range:
probe atom residue distance (Å) B Occ
A:W501

b:80.4
occ:0.43
 W5 A:TEW501 0.0 80.4 0.4
O22 A:TEW501 1.7 81.0 0.4
O21 A:TEW501 1.7 80.1 0.4
O17 A:TEW501 1.9 80.2 0.4
O20 A:TEW501 2.0 80.7 0.4
O11 A:TEW501 2.3 81.1 0.4
O12 A:TEW501 2.3 80.0 0.4
W6 A:TEW501 3.1 81.4 0.4
TE1 A:TEW501 3.2 80.6 0.4
W4 A:TEW501 3.3 79.5 0.4
O13 A:TEW501 3.5 80.7 0.4
O18 A:TEW501 3.8 79.1 0.4
O7 A:TEW501 4.0 80.2 0.4
O19 A:TEW501 4.1 79.6 0.4
O23 A:TEW501 4.2 82.0 0.4
O31 A:TEW501 4.4 81.6 0.4
O10 A:TEW501 4.5 79.3 0.4
O14 A:TEW501 4.6 81.8 0.4
O1 A:TEW501 4.8 80.0 0.4
CB A:SER110 4.8 73.8 1.0
O2 A:TEW501 4.8 81.2 0.4

Tungsten binding site 6 out of 17 in 7owz

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Tungsten binding site 6 out of 17 in the Heterodimeric Murine Trna-Guanine Transglycosylase in Complex with Queuine and in the Presence of Anderson-Evans Type (Tew) and Strandberg Type Polyoxometalate (Pom)


Mono view


Stereo pair view

A full contact list of Tungsten with other atoms in the W binding site number 6 of Heterodimeric Murine Trna-Guanine Transglycosylase in Complex with Queuine and in the Presence of Anderson-Evans Type (Tew) and Strandberg Type Polyoxometalate (Pom) within 5.0Å range:
probe atom residue distance (Å) B Occ
A:W501

b:81.4
occ:0.43
 W6 A:TEW501 0.0 81.4 0.4
O31 A:TEW501 1.7 81.6 0.4
O23 A:TEW501 1.7 82.0 0.4
O20 A:TEW501 1.9 80.7 0.4
O14 A:TEW501 1.9 81.8 0.4
O13 A:TEW501 2.2 80.7 0.4
O11 A:TEW501 2.3 81.1 0.4
W3 A:TEW501 3.1 81.3 0.4
TE1 A:TEW501 3.1 80.6 0.4
W5 A:TEW501 3.1 80.4 0.4
O22 A:TEW501 3.4 81.0 0.4
O2 A:TEW501 3.5 81.2 0.4
O12 A:TEW501 3.8 80.0 0.4
O16 A:TEW501 4.2 81.0 0.4
O15 A:TEW501 4.4 81.8 0.4
O21 A:TEW501 4.4 80.1 0.4
O17 A:TEW501 4.5 80.2 0.4
O7 A:TEW501 4.6 80.2 0.4
O1 A:TEW501 4.7 80.0 0.4
O4 A:TEW501 4.7 80.7 0.4

Tungsten binding site 7 out of 17 in 7owz

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Tungsten binding site 7 out of 17 in the Heterodimeric Murine Trna-Guanine Transglycosylase in Complex with Queuine and in the Presence of Anderson-Evans Type (Tew) and Strandberg Type Polyoxometalate (Pom)


Mono view


Stereo pair view

A full contact list of Tungsten with other atoms in the W binding site number 7 of Heterodimeric Murine Trna-Guanine Transglycosylase in Complex with Queuine and in the Presence of Anderson-Evans Type (Tew) and Strandberg Type Polyoxometalate (Pom) within 5.0Å range:
probe atom residue distance (Å) B Occ
A:W502

b:61.6
occ:0.37
 W1 A:TEW502 0.0 61.6 0.4
O6 A:TEW502 1.7 61.3 0.4
O5 A:TEW502 1.7 62.2 0.4
O4 A:TEW502 1.9 61.8 0.4
O3 A:TEW502 2.0 61.3 0.4
O1 A:TEW502 2.2 61.0 0.4
O2 A:TEW502 2.3 61.9 0.4
W2 A:TEW502 3.1 60.7 0.4
TE1 A:TEW502 3.2 61.4 0.4
W3 A:TEW502 3.3 62.3 0.4
O7 A:TEW502 3.6 61.1 0.4
O15 A:TEW502 3.7 62.8 0.4
O13 A:TEW502 3.9 61.7 0.4
OH A:TYR107 4.0 66.1 1.0
O16 A:TEW502 4.0 62.4 0.4
O8 A:TEW502 4.2 60.3 0.4
O14 A:TEW502 4.4 62.6 0.4
O9 A:TEW502 4.5 60.5 0.4
O10 A:TEW502 4.6 60.4 0.4
O11 A:TEW502 4.8 61.8 0.4
O12 A:TEW502 4.8 61.0 0.4
CZ A:TYR107 4.9 64.2 1.0
NE1 A:TRP116 4.9 59.1 1.0

Tungsten binding site 8 out of 17 in 7owz

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Tungsten binding site 8 out of 17 in the Heterodimeric Murine Trna-Guanine Transglycosylase in Complex with Queuine and in the Presence of Anderson-Evans Type (Tew) and Strandberg Type Polyoxometalate (Pom)


Mono view


Stereo pair view

A full contact list of Tungsten with other atoms in the W binding site number 8 of Heterodimeric Murine Trna-Guanine Transglycosylase in Complex with Queuine and in the Presence of Anderson-Evans Type (Tew) and Strandberg Type Polyoxometalate (Pom) within 5.0Å range:
probe atom residue distance (Å) B Occ
A:W502

b:60.7
occ:0.37
 W2 A:TEW502 0.0 60.7 0.4
O9 A:TEW502 1.7 60.5 0.4
O8 A:TEW502 1.7 60.3 0.4
O3 A:TEW502 1.9 61.3 0.4
O10 A:TEW502 1.9 60.4 0.4
O7 A:TEW502 2.2 61.1 0.4
O1 A:TEW502 2.3 61.0 0.4
W1 A:TEW502 3.1 61.6 0.4
TE1 A:TEW502 3.1 61.4 0.4
W4 A:TEW502 3.1 60.5 0.4
O6 A:TEW502 3.4 61.3 0.4
O12 A:TEW502 3.6 61.0 0.4
O2 A:TEW502 3.8 61.9 0.4
N A:ARG121 3.9 58.8 1.0
CB A:ARG121 4.2 59.6 1.0
O19 A:TEW502 4.2 60.5 0.4
CA A:GLY120 4.4 59.4 1.0
O18 A:TEW502 4.4 60.1 0.4
O5 A:TEW502 4.4 62.2 0.4
O4 A:TEW502 4.5 61.8 0.4
C A:GLY120 4.6 58.0 1.0
O11 A:TEW502 4.6 61.8 0.4
CA A:ARG121 4.7 58.0 1.0
O13 A:TEW502 4.7 61.7 0.4
O17 A:TEW502 4.7 61.0 0.4
NE1 A:TRP116 4.8 59.1 1.0

Tungsten binding site 9 out of 17 in 7owz

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Tungsten binding site 9 out of 17 in the Heterodimeric Murine Trna-Guanine Transglycosylase in Complex with Queuine and in the Presence of Anderson-Evans Type (Tew) and Strandberg Type Polyoxometalate (Pom)


Mono view


Stereo pair view

A full contact list of Tungsten with other atoms in the W binding site number 9 of Heterodimeric Murine Trna-Guanine Transglycosylase in Complex with Queuine and in the Presence of Anderson-Evans Type (Tew) and Strandberg Type Polyoxometalate (Pom) within 5.0Å range:
probe atom residue distance (Å) B Occ
A:W502

b:62.3
occ:0.37
 W3 A:TEW502 0.0 62.3 0.4
O15 A:TEW502 1.7 62.8 0.4
O16 A:TEW502 1.7 62.4 0.4
O14 A:TEW502 1.9 62.6 0.4
O4 A:TEW502 2.0 61.8 0.4
O2 A:TEW502 2.3 61.9 0.4
O13 A:TEW502 2.3 61.7 0.4
W6 A:TEW502 3.1 62.3 0.4
TE1 A:TEW502 3.2 61.4 0.4
W1 A:TEW502 3.3 61.6 0.4
O31 A:TEW502 3.4 62.6 0.4
NH1 A:ARG121 3.5 63.9 1.0
O1 A:TEW502 3.5 61.0 0.4
O5 A:TEW502 3.9 62.2 0.4
O23 A:TEW502 3.9 62.8 0.4
O11 A:TEW502 3.9 61.8 0.4
OH A:TYR107 4.3 66.1 1.0
O20 A:TEW502 4.4 61.7 0.4
CZ A:ARG121 4.5 63.1 1.0
O6 A:TEW502 4.6 61.3 0.4
O3 A:TEW502 4.7 61.3 0.4
CE2 A:TYR107 4.8 63.0 1.0
O12 A:TEW502 4.8 61.0 0.4
NE A:ARG121 4.8 62.1 1.0
O7 A:TEW502 4.8 61.1 0.4

Tungsten binding site 10 out of 17 in 7owz

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Tungsten binding site 10 out of 17 in the Heterodimeric Murine Trna-Guanine Transglycosylase in Complex with Queuine and in the Presence of Anderson-Evans Type (Tew) and Strandberg Type Polyoxometalate (Pom)


Mono view


Stereo pair view

A full contact list of Tungsten with other atoms in the W binding site number 10 of Heterodimeric Murine Trna-Guanine Transglycosylase in Complex with Queuine and in the Presence of Anderson-Evans Type (Tew) and Strandberg Type Polyoxometalate (Pom) within 5.0Å range:
probe atom residue distance (Å) B Occ
A:W502

b:60.5
occ:0.37
 W4 A:TEW502 0.0 60.5 0.4
O18 A:TEW502 1.7 60.1 0.4
O19 A:TEW502 1.7 60.5 0.4
O10 A:TEW502 1.9 60.4 0.4
O17 A:TEW502 2.0 61.0 0.4
O12 A:TEW502 2.3 61.0 0.4
O7 A:TEW502 2.3 61.1 0.4
W2 A:TEW502 3.1 60.7 0.4
TE1 A:TEW502 3.2 61.4 0.4
W5 A:TEW502 3.3 61.4 0.4
O9 A:TEW502 3.4 60.5 0.4
O11 A:TEW502 3.6 61.8 0.4
O8 A:TEW502 3.9 60.3 0.4
O1 A:TEW502 3.9 61.0 0.4
O21 A:TEW502 3.9 61.0 0.4
O3 A:TEW502 4.4 61.3 0.4
O22 A:TEW502 4.6 61.9 0.4
N A:ARG121 4.6 58.8 1.0
O20 A:TEW502 4.7 61.7 0.4
CA A:GLY120 4.8 59.4 1.0
O13 A:TEW502 4.8 61.7 0.4
O2 A:TEW502 4.8 61.9 0.4
O A:GLY119 4.9 59.5 1.0

Reference:

M.Sebastiani, A.Heine, K.Reuter. Heterodimeric Trna-Guanine Transglycosylase From Mouse To Be Published.
Page generated: Sat Oct 12 11:43:40 2024

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