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Tungsten in PDB 4pe5: Crystal Structure of GLUN1A/GLUN2B Nmda Receptor Ion Channel

Protein crystallography data

The structure of Crystal Structure of GLUN1A/GLUN2B Nmda Receptor Ion Channel, PDB code: 4pe5 was solved by E.Karakas, H.Furukawa, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 29.72 / 3.96
Space group P 1 21 1
Cell size a, b, c (Å), α, β, γ (°) 116.825, 163.186, 163.137, 90.00, 93.81, 90.00
R / Rfree (%) 25.6 / 29.5

Tungsten Binding Sites:

Pages:

>>> Page 1 <<< Page 2, Binding sites: 11 - 20; Page 3, Binding sites: 21 - 30; Page 4, Binding sites: 31 - 40; Page 5, Binding sites: 41 - 50; Page 6, Binding sites: 51 - 60; Page 7, Binding sites: 61 - 70; Page 8, Binding sites: 71 - 80; Page 9, Binding sites: 81 - 84;

Binding sites:

The binding sites of Tungsten atom in the Crystal Structure of GLUN1A/GLUN2B Nmda Receptor Ion Channel (pdb code 4pe5). This binding sites where shown within 5.0 Angstroms radius around Tungsten atom.
In total 84 binding sites of Tungsten where determined in the Crystal Structure of GLUN1A/GLUN2B Nmda Receptor Ion Channel, PDB code: 4pe5:
Jump to Tungsten binding site number: 1; 2; 3; 4; 5; 6; 7; 8; 9; 10;

Tungsten binding site 1 out of 84 in 4pe5

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Tungsten binding site 1 out of 84 in the Crystal Structure of GLUN1A/GLUN2B Nmda Receptor Ion Channel


Mono view


Stereo pair view

A full contact list of Tungsten with other atoms in the W binding site number 1 of Crystal Structure of GLUN1A/GLUN2B Nmda Receptor Ion Channel within 5.0Å range:
probe atom residue distance (Å) B Occ
A:W901

b:0.7
occ:0.50
W B:W904 2.5 0.9 0.6
W A:W910 3.0 0.7 0.5
W A:W906 3.0 0.1 0.5
W A:W902 3.0 0.9 0.5
W A:W905 3.0 0.3 0.5
W B:W905 3.6 0.5 0.6
W A:W909 4.2 0.3 0.5
W A:W903 4.3 0.9 0.5
W B:W903 4.4 0.7 0.6
W B:W901 4.7 0.9 0.6

Tungsten binding site 2 out of 84 in 4pe5

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Tungsten binding site 2 out of 84 in the Crystal Structure of GLUN1A/GLUN2B Nmda Receptor Ion Channel


Mono view


Stereo pair view

A full contact list of Tungsten with other atoms in the W binding site number 2 of Crystal Structure of GLUN1A/GLUN2B Nmda Receptor Ion Channel within 5.0Å range:
probe atom residue distance (Å) B Occ
A:W902

b:0.9
occ:0.50
W B:W904 2.4 0.9 0.6
W B:W903 2.9 0.7 0.6
W A:W903 3.0 0.9 0.5
W A:W907 3.0 0.6 0.5
W A:W901 3.0 0.7 0.5
W A:W910 3.0 0.7 0.5
W A:W937 3.3 0.6 0.6
W A:W905 4.2 0.3 0.5
W A:W908 4.2 0.7 0.5

Tungsten binding site 3 out of 84 in 4pe5

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Tungsten binding site 3 out of 84 in the Crystal Structure of GLUN1A/GLUN2B Nmda Receptor Ion Channel


Mono view


Stereo pair view

A full contact list of Tungsten with other atoms in the W binding site number 3 of Crystal Structure of GLUN1A/GLUN2B Nmda Receptor Ion Channel within 5.0Å range:
probe atom residue distance (Å) B Occ
A:W903

b:0.9
occ:0.50
W A:W937 2.5 0.6 0.6
W B:W904 2.5 0.9 0.6
W A:W907 3.0 0.6 0.5
W A:W902 3.0 0.9 0.5
W A:W904 3.0 0.6 0.5
W A:W905 3.0 0.3 0.5
W B:W902 3.6 0.6 0.6
W B:W901 3.7 0.9 0.6
W A:W911 4.1 0.5 0.5
W A:W901 4.3 0.7 0.5
W B:W903 4.4 0.7 0.6

Tungsten binding site 4 out of 84 in 4pe5

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Tungsten binding site 4 out of 84 in the Crystal Structure of GLUN1A/GLUN2B Nmda Receptor Ion Channel


Mono view


Stereo pair view

A full contact list of Tungsten with other atoms in the W binding site number 4 of Crystal Structure of GLUN1A/GLUN2B Nmda Receptor Ion Channel within 5.0Å range:
probe atom residue distance (Å) B Occ
A:W904

b:0.6
occ:0.50
W A:W912 3.0 0.5 0.5
W A:W905 3.0 0.3 0.5
W A:W911 3.0 0.5 0.5
W A:W903 3.0 0.9 0.5
W A:W906 4.3 0.1 0.5
W A:W907 4.4 0.6 0.5
W B:W904 4.5 0.9 0.6
W B:W901 4.6 0.9 0.6

Tungsten binding site 5 out of 84 in 4pe5

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Tungsten binding site 5 out of 84 in the Crystal Structure of GLUN1A/GLUN2B Nmda Receptor Ion Channel


Mono view


Stereo pair view

A full contact list of Tungsten with other atoms in the W binding site number 5 of Crystal Structure of GLUN1A/GLUN2B Nmda Receptor Ion Channel within 5.0Å range:
probe atom residue distance (Å) B Occ
A:W905

b:0.3
occ:0.50
W B:W904 2.5 0.9 0.6
W B:W901 2.6 0.9 0.6
W A:W904 3.0 0.6 0.5
W A:W906 3.0 0.1 0.5
W A:W903 3.0 0.9 0.5
W A:W901 3.0 0.7 0.5
W B:W905 3.7 0.5 0.6
W A:W902 4.2 0.9 0.5
W A:W912 4.2 0.5 0.5
W B:W902 4.7 0.6 0.6
W A:W937 4.8 0.6 0.6

Tungsten binding site 6 out of 84 in 4pe5

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Tungsten binding site 6 out of 84 in the Crystal Structure of GLUN1A/GLUN2B Nmda Receptor Ion Channel


Mono view


Stereo pair view

A full contact list of Tungsten with other atoms in the W binding site number 6 of Crystal Structure of GLUN1A/GLUN2B Nmda Receptor Ion Channel within 5.0Å range:
probe atom residue distance (Å) B Occ
A:W906

b:0.1
occ:0.50
W A:W912 3.0 0.5 0.5
W A:W901 3.0 0.7 0.5
W A:W905 3.0 0.3 0.5
W A:W909 3.0 0.3 0.5
W A:W904 4.3 0.6 0.5
W A:W910 4.3 0.7 0.5
W B:W904 4.5 0.9 0.6

Tungsten binding site 7 out of 84 in 4pe5

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Tungsten binding site 7 out of 84 in the Crystal Structure of GLUN1A/GLUN2B Nmda Receptor Ion Channel


Mono view


Stereo pair view

A full contact list of Tungsten with other atoms in the W binding site number 7 of Crystal Structure of GLUN1A/GLUN2B Nmda Receptor Ion Channel within 5.0Å range:
probe atom residue distance (Å) B Occ
A:W907

b:0.6
occ:0.50
W A:W908 3.0 0.7 0.5
W A:W911 3.0 0.5 0.5
W A:W903 3.0 0.9 0.5
W A:W902 3.0 0.9 0.5
W A:W937 4.2 0.6 0.6
W A:W910 4.2 0.7 0.5
W A:W904 4.4 0.6 0.5
W B:W904 4.5 0.9 0.6

Tungsten binding site 8 out of 84 in 4pe5

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Tungsten binding site 8 out of 84 in the Crystal Structure of GLUN1A/GLUN2B Nmda Receptor Ion Channel


Mono view


Stereo pair view

A full contact list of Tungsten with other atoms in the W binding site number 8 of Crystal Structure of GLUN1A/GLUN2B Nmda Receptor Ion Channel within 5.0Å range:
probe atom residue distance (Å) B Occ
A:W908

b:0.7
occ:0.50
W A:W910 3.0 0.7 0.5
W A:W911 3.0 0.5 0.5
W A:W907 3.0 0.6 0.5
W A:W909 3.0 0.3 0.5
W A:W912 4.2 0.5 0.5
W A:W902 4.2 0.9 0.5

Tungsten binding site 9 out of 84 in 4pe5

Go back to Tungsten Binding Sites List in 4pe5
Tungsten binding site 9 out of 84 in the Crystal Structure of GLUN1A/GLUN2B Nmda Receptor Ion Channel


Mono view


Stereo pair view

A full contact list of Tungsten with other atoms in the W binding site number 9 of Crystal Structure of GLUN1A/GLUN2B Nmda Receptor Ion Channel within 5.0Å range:
probe atom residue distance (Å) B Occ
A:W909

b:0.3
occ:0.50
W A:W908 3.0 0.7 0.5
W A:W910 3.0 0.7 0.5
W A:W912 3.0 0.5 0.5
W A:W906 3.0 0.1 0.5
W A:W901 4.2 0.7 0.5
W A:W911 4.3 0.5 0.5

Tungsten binding site 10 out of 84 in 4pe5

Go back to Tungsten Binding Sites List in 4pe5
Tungsten binding site 10 out of 84 in the Crystal Structure of GLUN1A/GLUN2B Nmda Receptor Ion Channel


Mono view


Stereo pair view

A full contact list of Tungsten with other atoms in the W binding site number 10 of Crystal Structure of GLUN1A/GLUN2B Nmda Receptor Ion Channel within 5.0Å range:
probe atom residue distance (Å) B Occ
A:W910

b:0.7
occ:0.50
W A:W908 3.0 0.7 0.5
W A:W901 3.0 0.7 0.5
W A:W902 3.0 0.9 0.5
W A:W909 3.0 0.3 0.5
W A:W907 4.2 0.6 0.5
W A:W906 4.3 0.1 0.5
W B:W904 4.5 0.9 0.6

Reference:

E.Karakas, H.Furukawa. Crystal Structure of A Heterotetrameric Nmda Receptor Ion Channel. Science V. 344 992 2014.
ISSN: ESSN 1095-9203
PubMed: 24876489
DOI: 10.1126/SCIENCE.1251915
Page generated: Wed Dec 16 02:34:48 2020

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