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Tungsten in PDB 2onk: Abc Transporter Modbc in Complex with Its Binding Protein Moda

Protein crystallography data

The structure of Abc Transporter Modbc in Complex with Its Binding Protein Moda, PDB code: 2onk was solved by K.Hollenstein, D.C.Frei, K.P.Locher, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 30.00 / 3.10
Space group P 1 21 1
Cell size a, b, c (Å), α, β, γ (°) 93.032, 171.203, 158.470, 90.00, 98.79, 90.00
R / Rfree (%) 25.6 / 28.3

Other elements in 2onk:

The structure of Abc Transporter Modbc in Complex with Its Binding Protein Moda also contains other interesting chemical elements:

Magnesium (Mg) 6 atoms

Tungsten Binding Sites:

The binding sites of Tungsten atom in the Abc Transporter Modbc in Complex with Its Binding Protein Moda (pdb code 2onk). This binding sites where shown within 5.0 Angstroms radius around Tungsten atom.
In total 2 binding sites of Tungsten where determined in the Abc Transporter Modbc in Complex with Its Binding Protein Moda, PDB code: 2onk:
Jump to Tungsten binding site number: 1; 2;

Tungsten binding site 1 out of 2 in 2onk

Go back to Tungsten Binding Sites List in 2onk
Tungsten binding site 1 out of 2 in the Abc Transporter Modbc in Complex with Its Binding Protein Moda


Mono view


Stereo pair view

A full contact list of Tungsten with other atoms in the W binding site number 1 of Abc Transporter Modbc in Complex with Its Binding Protein Moda within 5.0Å range:
probe atom residue distance (Å) B Occ
E:W701

b:49.5
occ:0.90
W E:WO4701 0.0 49.5 0.9
OD1 E:ASP153 1.9 69.5 1.0
O1 E:WO4701 2.0 49.5 1.0
O2 E:WO4701 2.0 49.5 1.0
O3 E:WO4701 2.1 49.5 1.0
O4 E:WO4701 2.1 49.5 1.0
OE2 E:GLU218 2.1 50.4 1.0
CG E:ASP153 2.8 69.5 1.0
CD E:GLU218 2.9 50.4 1.0
OD2 E:ASP153 3.0 69.5 1.0
OE1 E:GLU218 3.0 50.4 1.0
CB E:ALA40 3.7 56.9 1.0
N E:GLY41 3.9 59.2 1.0
CD E:PRO154 3.9 54.8 1.0
CE2 E:TYR236 4.1 88.3 1.0
CB E:ASP153 4.1 69.5 1.0
OH E:TYR236 4.2 88.3 1.0
CB E:ALA90 4.3 22.0 1.0
CA E:GLY69 4.3 39.2 1.0
OG E:SER42 4.3 28.0 1.0
N E:SER70 4.4 48.3 1.0
CG E:GLU218 4.4 50.4 1.0
N E:CYS155 4.4 37.4 1.0
N E:PRO154 4.5 53.4 1.0
N E:SER42 4.5 89.1 1.0
CA E:ALA40 4.5 60.8 1.0
CB E:CYS155 4.5 50.7 1.0
OG E:SER70 4.6 0.7 1.0
C E:ALA40 4.7 60.8 1.0
CZ E:TYR236 4.7 88.3 1.0
CA E:GLY41 4.7 59.2 1.0
CA E:ASP153 4.8 61.7 1.0
CG E:PRO154 4.9 54.8 1.0
C E:GLY69 4.9 39.2 1.0
C E:ASP153 5.0 61.7 1.0
CB E:SER42 5.0 28.0 1.0

Tungsten binding site 2 out of 2 in 2onk

Go back to Tungsten Binding Sites List in 2onk
Tungsten binding site 2 out of 2 in the Abc Transporter Modbc in Complex with Its Binding Protein Moda


Mono view


Stereo pair view

A full contact list of Tungsten with other atoms in the W binding site number 2 of Abc Transporter Modbc in Complex with Its Binding Protein Moda within 5.0Å range:
probe atom residue distance (Å) B Occ
J:W702

b:48.1
occ:0.90
W J:WO4702 0.0 48.1 0.9
OD1 J:ASP153 2.0 54.8 1.0
O1 J:WO4702 2.0 48.1 1.0
O2 J:WO4702 2.0 48.1 1.0
O3 J:WO4702 2.1 48.1 1.0
O4 J:WO4702 2.1 48.1 1.0
OE2 J:GLU218 2.2 37.0 1.0
CG J:ASP153 2.8 54.8 1.0
CD J:GLU218 2.9 37.0 1.0
OE1 J:GLU218 3.0 37.0 1.0
OD2 J:ASP153 3.0 54.8 1.0
CB J:ALA40 3.9 91.9 1.0
CD J:PRO154 3.9 80.5 1.0
N J:GLY41 4.0 43.9 1.0
CE2 J:TYR236 4.1 49.5 1.0
CB J:ASP153 4.1 54.8 1.0
CA J:GLY69 4.2 69.9 1.0
OH J:TYR236 4.2 49.5 1.0
CB J:ALA90 4.3 36.8 1.0
N J:SER70 4.4 71.7 1.0
OG J:SER42 4.4 62.5 1.0
CG J:GLU218 4.4 37.0 1.0
N J:PRO154 4.5 65.6 1.0
N J:CYS155 4.5 26.8 1.0
N J:SER42 4.5 71.3 1.0
CA J:ALA40 4.6 67.9 1.0
CB J:CYS155 4.6 46.7 1.0
CZ J:TYR236 4.7 49.5 1.0
OG J:SER70 4.7 72.1 1.0
C J:ALA40 4.7 67.9 1.0
CA J:ASP153 4.7 98.3 1.0
CA J:GLY41 4.8 43.9 1.0
C J:GLY69 4.9 69.9 1.0
CG J:PRO154 4.9 80.5 1.0
C J:ASP153 5.0 98.3 1.0

Reference:

K.Hollenstein, D.C.Frei, K.P.Locher. Structure of An Abc Transporter in Complex with Its Binding Protein. Nature V. 446 213 2007.
ISSN: ISSN 0028-0836
PubMed: 17322901
DOI: 10.1038/NATURE05626
Page generated: Thu Oct 29 07:08:13 2020

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