Atomistry » Tungsten » PDB 1aor-2hcm » 1z7m
Atomistry »
  Tungsten »
    PDB 1aor-2hcm »
      1z7m »

Tungsten in PDB 1z7m: Atp Phosphoribosyl Transferase (Hiszg Atp-Prtase) From Lactococcus Lactis

Enzymatic activity of Atp Phosphoribosyl Transferase (Hiszg Atp-Prtase) From Lactococcus Lactis

All present enzymatic activity of Atp Phosphoribosyl Transferase (Hiszg Atp-Prtase) From Lactococcus Lactis:
2.4.2.17;

Protein crystallography data

The structure of Atp Phosphoribosyl Transferase (Hiszg Atp-Prtase) From Lactococcus Lactis, PDB code: 1z7m was solved by K.S.Champagne, M.Sissler, Y.Larrabee, S.Doublie, C.S.Francklyn, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 40.00 / 2.90
Space group P 21 21 2
Cell size a, b, c (Å), α, β, γ (°) 151.684, 222.936, 86.380, 90.00, 90.00, 90.00
R / Rfree (%) 24.5 / 28.5

Tungsten Binding Sites:

The binding sites of Tungsten atom in the Atp Phosphoribosyl Transferase (Hiszg Atp-Prtase) From Lactococcus Lactis (pdb code 1z7m). This binding sites where shown within 5.0 Angstroms radius around Tungsten atom.
In total 2 binding sites of Tungsten where determined in the Atp Phosphoribosyl Transferase (Hiszg Atp-Prtase) From Lactococcus Lactis, PDB code: 1z7m:
Jump to Tungsten binding site number: 1; 2;

Tungsten binding site 1 out of 2 in 1z7m

Go back to Tungsten Binding Sites List in 1z7m
Tungsten binding site 1 out of 2 in the Atp Phosphoribosyl Transferase (Hiszg Atp-Prtase) From Lactococcus Lactis


Mono view


Stereo pair view

A full contact list of Tungsten with other atoms in the W binding site number 1 of Atp Phosphoribosyl Transferase (Hiszg Atp-Prtase) From Lactococcus Lactis within 5.0Å range:
probe atom residue distance (Å) B Occ
A:W329

b:0.2
occ:0.40
W A:WO4329 0.0 0.2 0.4
O2 A:WO4329 1.7 0.7 0.4
O3 A:WO4329 1.8 0.1 0.4
O4 A:WO4329 1.8 0.5 0.4
O1 A:WO4329 1.8 0.8 0.4
NZ G:LYS136 3.9 78.6 1.0
NE2 A:HIS74 4.3 90.3 1.0
CE1 A:HIS74 4.4 90.4 1.0
CE G:LYS136 4.8 78.2 1.0
NZ G:LYS122 4.8 71.0 1.0

Tungsten binding site 2 out of 2 in 1z7m

Go back to Tungsten Binding Sites List in 1z7m
Tungsten binding site 2 out of 2 in the Atp Phosphoribosyl Transferase (Hiszg Atp-Prtase) From Lactococcus Lactis


Mono view


Stereo pair view

A full contact list of Tungsten with other atoms in the W binding site number 2 of Atp Phosphoribosyl Transferase (Hiszg Atp-Prtase) From Lactococcus Lactis within 5.0Å range:
probe atom residue distance (Å) B Occ
F:W210

b:0.9
occ:0.40
W F:WO4210 0.0 0.9 0.4
O2 F:WO4210 1.7 0.7 0.4
O3 F:WO4210 1.8 0.5 0.4
O4 F:WO4210 1.8 0.8 0.4
O1 F:WO4210 1.8 0.7 0.4
NZ F:LYS136 3.8 77.8 1.0
NE2 C:HIS74 4.0 91.7 1.0
CE1 C:HIS74 4.4 90.7 1.0
CE F:LYS136 4.8 78.2 1.0
CD2 C:HIS74 4.9 91.3 1.0
NH2 D:ARG116 5.0 92.2 1.0

Reference:

K.S.Champagne, M.Sissler, Y.Larrabee, S.Doublie, C.S.Francklyn. Activation of the Hetero-Octameric Atp Phosphoribosyl Transferase Through Subunit Interface Rearrangement By A Trna Synthetase Paralog. J.Biol.Chem. V. 280 34096 2005.
ISSN: ISSN 0021-9258
PubMed: 16051603
DOI: 10.1074/JBC.M505041200
Page generated: Sat Oct 12 03:50:15 2024

Last articles

Zn in 9JPJ
Zn in 9JP7
Zn in 9JPK
Zn in 9JPL
Zn in 9GN6
Zn in 9GN7
Zn in 9GKU
Zn in 9GKW
Zn in 9GKX
Zn in 9GL0
© Copyright 2008-2020 by atomistry.com
Home   |    Site Map   |    Copyright   |    Contact us   |    Privacy