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Tungsten in PDB 1z7m: Atp Phosphoribosyl Transferase (Hiszg Atp-Prtase) From Lactococcus Lactis

Enzymatic activity of Atp Phosphoribosyl Transferase (Hiszg Atp-Prtase) From Lactococcus Lactis

All present enzymatic activity of Atp Phosphoribosyl Transferase (Hiszg Atp-Prtase) From Lactococcus Lactis:
2.4.2.17;

Protein crystallography data

The structure of Atp Phosphoribosyl Transferase (Hiszg Atp-Prtase) From Lactococcus Lactis, PDB code: 1z7m was solved by K.S.Champagne, M.Sissler, Y.Larrabee, S.Doublie, C.S.Francklyn, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 40.00 / 2.90
Space group P 21 21 2
Cell size a, b, c (Å), α, β, γ (°) 151.684, 222.936, 86.380, 90.00, 90.00, 90.00
R / Rfree (%) 24.5 / 28.5

Tungsten Binding Sites:

The binding sites of Tungsten atom in the Atp Phosphoribosyl Transferase (Hiszg Atp-Prtase) From Lactococcus Lactis (pdb code 1z7m). This binding sites where shown within 5.0 Angstroms radius around Tungsten atom.
In total 2 binding sites of Tungsten where determined in the Atp Phosphoribosyl Transferase (Hiszg Atp-Prtase) From Lactococcus Lactis, PDB code: 1z7m:
Jump to Tungsten binding site number: 1; 2;

Tungsten binding site 1 out of 2 in 1z7m

Go back to Tungsten Binding Sites List in 1z7m
Tungsten binding site 1 out of 2 in the Atp Phosphoribosyl Transferase (Hiszg Atp-Prtase) From Lactococcus Lactis


Mono view


Stereo pair view

A full contact list of Tungsten with other atoms in the W binding site number 1 of Atp Phosphoribosyl Transferase (Hiszg Atp-Prtase) From Lactococcus Lactis within 5.0Å range:
probe atom residue distance (Å) B Occ
A:W329

b:0.2
occ:0.40
W A:WO4329 0.0 0.2 0.4
O2 A:WO4329 1.7 0.7 0.4
O3 A:WO4329 1.8 0.1 0.4
O4 A:WO4329 1.8 0.5 0.4
O1 A:WO4329 1.8 0.8 0.4
NZ G:LYS136 3.9 78.6 1.0
NE2 A:HIS74 4.3 90.3 1.0
CE1 A:HIS74 4.4 90.4 1.0
CE G:LYS136 4.8 78.2 1.0
NZ G:LYS122 4.8 71.0 1.0

Tungsten binding site 2 out of 2 in 1z7m

Go back to Tungsten Binding Sites List in 1z7m
Tungsten binding site 2 out of 2 in the Atp Phosphoribosyl Transferase (Hiszg Atp-Prtase) From Lactococcus Lactis


Mono view


Stereo pair view

A full contact list of Tungsten with other atoms in the W binding site number 2 of Atp Phosphoribosyl Transferase (Hiszg Atp-Prtase) From Lactococcus Lactis within 5.0Å range:
probe atom residue distance (Å) B Occ
F:W210

b:0.9
occ:0.40
W F:WO4210 0.0 0.9 0.4
O2 F:WO4210 1.7 0.7 0.4
O3 F:WO4210 1.8 0.5 0.4
O4 F:WO4210 1.8 0.8 0.4
O1 F:WO4210 1.8 0.7 0.4
NZ F:LYS136 3.8 77.8 1.0
NE2 C:HIS74 4.0 91.7 1.0
CE1 C:HIS74 4.4 90.7 1.0
CE F:LYS136 4.8 78.2 1.0
CD2 C:HIS74 4.9 91.3 1.0
NH2 D:ARG116 5.0 92.2 1.0

Reference:

K.S.Champagne, M.Sissler, Y.Larrabee, S.Doublie, C.S.Francklyn. Activation of the Hetero-Octameric Atp Phosphoribosyl Transferase Through Subunit Interface Rearrangement By A Trna Synthetase Paralog. J.Biol.Chem. V. 280 34096 2005.
ISSN: ISSN 0021-9258
PubMed: 16051603
DOI: 10.1074/JBC.M505041200
Page generated: Wed Dec 16 02:33:29 2020

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