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Tungsten in PDB 1ytw: Yersinia Ptpase Complexed with Tungstate

Enzymatic activity of Yersinia Ptpase Complexed with Tungstate

All present enzymatic activity of Yersinia Ptpase Complexed with Tungstate:
3.1.3.48;

Protein crystallography data

The structure of Yersinia Ptpase Complexed with Tungstate, PDB code: 1ytw was solved by E.B.Fauman, H.L.Schubert, M.A.Saper, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 7.00 / 2.40
Space group P 21 21 21
Cell size a, b, c (Å), α, β, γ (°) 56.300, 49.800, 100.600, 90.00, 90.00, 90.00
R / Rfree (%) 17.9 / n/a

Tungsten Binding Sites:

The binding sites of Tungsten atom in the Yersinia Ptpase Complexed with Tungstate (pdb code 1ytw). This binding sites where shown within 5.0 Angstroms radius around Tungsten atom.
In total only one binding site of Tungsten was determined in the Yersinia Ptpase Complexed with Tungstate, PDB code: 1ytw:

Tungsten binding site 1 out of 1 in 1ytw

Go back to Tungsten Binding Sites List in 1ytw
Tungsten binding site 1 out of 1 in the Yersinia Ptpase Complexed with Tungstate


Mono view


Stereo pair view

A full contact list of Tungsten with other atoms in the W binding site number 1 of Yersinia Ptpase Complexed with Tungstate within 5.0Å range:
probe atom residue distance (Å) B Occ
A:W1

b:16.8
occ:1.00
W A:WO41 0.0 16.8 1.0
O4 A:WO41 1.7 17.7 1.0
O3 A:WO41 1.8 16.7 1.0
O1 A:WO41 1.8 16.8 1.0
O2 A:WO41 1.8 16.6 1.0
O A:HOH538 3.3 18.4 1.0
SG A:CYS403 3.5 7.4 1.0
N A:GLY408 3.9 2.3 1.0
NH2 A:ARG409 3.9 3.0 1.0
OD1 A:ASP356 4.0 14.8 1.0
CB A:ALA405 4.0 3.5 1.0
NE2 A:GLN446 4.1 16.5 1.0
NE A:ARG409 4.1 2.6 1.0
N A:ALA405 4.1 4.3 1.0
CA A:GLY408 4.2 2.4 1.0
O A:HOH664 4.3 42.6 1.0
N A:ARG409 4.3 3.4 1.0
CB A:CYS403 4.4 6.0 1.0
CZ A:ARG409 4.4 3.0 1.0
O A:HOH560 4.5 38.1 1.0
N A:GLY406 4.5 2.9 1.0
N A:ARG404 4.6 5.3 1.0
CA A:ALA405 4.6 3.8 1.0
N A:VAL407 4.6 2.1 1.0
CG A:ASP356 4.7 14.8 1.0
CG2 A:VAL407 4.8 2.0 1.0
C A:GLY408 4.8 2.9 1.0
CB A:ARG404 4.8 5.9 1.0
CD A:GLN446 4.9 16.1 1.0
NE2 A:GLN357 4.9 18.8 1.0
C A:VAL407 5.0 2.4 1.0
C A:ALA405 5.0 3.6 1.0

Reference:

E.B.Fauman, C.Yuvaniyama, H.L.Schubert, J.A.Stuckey, M.A.Saper. The X-Ray Crystal Structures of Yersinia Tyrosine Phosphatase with Bound Tungstate and Nitrate. Mechanistic Implications. J.Biol.Chem. V. 271 18780 1996.
ISSN: ISSN 0021-9258
PubMed: 8702535
DOI: 10.1074/JBC.271.31.18780
Page generated: Wed Dec 16 02:33:27 2020

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